Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_1955 |
Symbol | |
ID | 5831938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 2188034 |
End bp | 2188921 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641367756 |
Product | Sel1 domain-containing protein |
Protein accession | YP_001639425 |
Protein GI | 163851382 |
COG category | [R] General function prediction only |
COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.342903 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGACAT CTAGGACTGC CCCTTTCCGG CCCATGTGGC CGGCCGGGGC CGATCCGGGT CGGCTCCGGG CGGGGCTTCT CGCCGGGTTC CTCGGCTTTG CGCTGATGCT CACGGCCGTC GATCCCGGTA CGGCGCTCGA TGCGACCGCG CGCACGCCGG TCCCCGAGAA GGGATACCGT TCGGGCCGCG ACGCCCTGCG CTCGGGCGTG CGCGACTACA ACGCGGGCGA CAAGCAGGGC GCCGTGCGGG CGCTGGAATA CGCCGCCGAC CAGGGCCAGA CCCTGGCGTT GTGGAAGCTC GGCCGCATGT ACGCGGACGG CGACGGCGTG CCCCACGACG ACTTGAAGGC GTTCGAGTAC TTTTCGCGCA TCGCCGACGA CAACACCGAC GATTCGCCCG ACACCCCGAA TTCCGGCGTG GTGGCGAGCG CCTTCAACGC GCTCGGCACC TACTTCCTGG AGGGGATCAA GGGCACCTAT GTGCGCCCGA GCCCCGAGCG CGCCTACGAC ATGTTCAACT ACGCGGCGTC GTATTTCGGC GACCCGAACG CGCAGTACAA CCTCGCCCGG CTCTATCTCG ACGGCACCGG CGTCGAGCAG GATCCGCGCA AGGCCGCGCG CTGGTTCAAC CTCGCCGCCG AGAAGGGCCA CCGCCCGGCC CAGGCGCTGC TCGGCGACAT GCTCGTCAAC GGCACCGGCG TGCAGCGCCA GCCGGTGAAG GGGCTGACCT GGCTCGCCAT CGCCCGCGGC GGGGCGCAGG GTGCGGCCGA CAGCTGGATC GTCAATCTTT ACGACAAGGC CTGGGCCTCG GCCAACGAGG CCGACCGGGC GGATGCGATG GCTCAAGCGC AGTCGCTGTC GACGGGTTCG ACCCGCCGGC GGCGATAG
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Protein sequence | MPTSRTAPFR PMWPAGADPG RLRAGLLAGF LGFALMLTAV DPGTALDATA RTPVPEKGYR SGRDALRSGV RDYNAGDKQG AVRALEYAAD QGQTLALWKL GRMYADGDGV PHDDLKAFEY FSRIADDNTD DSPDTPNSGV VASAFNALGT YFLEGIKGTY VRPSPERAYD MFNYAASYFG DPNAQYNLAR LYLDGTGVEQ DPRKAARWFN LAAEKGHRPA QALLGDMLVN GTGVQRQPVK GLTWLAIARG GAQGAADSWI VNLYDKAWAS ANEADRADAM AQAQSLSTGS TRRRR
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