| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1881 |
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| Symbol | |
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| ID | 5831596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 2100534 |
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| End bp | 2103152 |
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| Gene Length | 2619 bp |
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| Protein Length | 872 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641367681 |
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| Product | PAS sensor protein |
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| Protein accession | YP_001639351 |
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| Protein GI | 163851308 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain
[COG3920] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTGGT CCGACGATCC TCTCGACAGT GTACCGAAGC AAAGCTTCGA CGATGTCGTG
CGTCTGGCTG CCGAGCTCTG TCAGGCTGCG CATGCGGTGA CCTGTTTGCA GGCGGGAGGG
CGCCTGCAAG TGCATGCCTC CTACAGTGCT GCCAGTGCCT CGACGGCGTT GGATCCGGAC
GTGTGCGCCG ATGCTGCCGT GACGGATGAG CTGCTCATCG TCCCGGACCT GCACGAGGGC
CCGGAGCGGA TGGGCTGTCC GCGGCTTACG GAGGGCTCAC AGATGCGCTT CTATGCGGCC
GTACGCCTGC AAGCGGCGGA TGGCACGGTG CTGGGCGTTC TATGCGTGCT GGATCCTCTG
CCGCGCCGGA AGGGCCTGAC CCCAGCCCAG CAGGAATGTC TACGGAGCCT TGCCCGTCAG
ACCGTTACGC TTCTTGAGGT GCGACGCGCA GCTCGGGTGC ATCGTACCCA GCGGATCCTG
CACGAGCGCA TCCTCGACAG CGCGACGGAT TACGCGATTA TCGCGACGGA CGGTGCCGGC
CGGATCACCC GCTGGAATGC AGGAGCCGAG CAGATCCTCG GCTGGCGCGA AGAGGAGATG
CTGGGCGAGC CCACCCAGCT GTTCTTCACG CCTGAGGACC GGGAAGCTGG GCGACTCAAG
ACCGAGATGG CGCTGGCACT GAAAGACGGC AGTGCGCCGG ATGAGCGCTG GCACCTGCGC
AAGGGCGGGG AGCGGTTCTG GGCTAGCAGC GAGCTCATGC CGTTGAGGGC TGAGAATGGC
TCCGTGCAGG GGTTCCTGAA GATCCTGCGC GATCGTACCC AGCAGCGCGT CGAAGCAGCC
GAGCGCAACT CCAGTGAGCT GCGCTTCCGC TCGCTCGTCG AGGTCAGCCC GCAGGTGGTG
TGGTTCGGCG ACGCCGCCGG CAACATCACC TACTGCAATC CTATGTGGTG CGAGTACACT
GGACTAACGC TAGGCGACAC AAGCGGGGCG GACTGGGCCA GCGTGATCCA TCCAGACCAG
CAGGAGCGTG TGCTGGAGGT CTGGAGGCAT GCGGTTGAGA CCGGAGGATC CTACGAGGTC
GAGATCCCGT TCCGCCGTGC CAGCGATGGC CAGTACCGCT GGTTCCTCGC ACGGGGCAGG
CCTGTGCGCG ATGCGGCCGG CCTGCTGGAA AGCTGGATCG GCATCGCCAT CGACATCCAC
GACCGCAAGG AGGCTGAGGT AGCGCTCCGC AGCGCGCAGG AGCAGTTGCG CCTTGCCGTC
GAGGCGACCG AGACGGGCGT GTTCGACTAC GACCTAGTTG CAGACGAGCT GAAGTGGGAC
ACTCGCATCC GCTCCTTCTA CGGCCTGGCG CCGGACGCCC CCGTCGACCT GTCCGTCCAC
TTGGCCTGCG TGCACCCGGA CGACCACGAA CGAGCGGACA AGGCGGTCGC CGCTGCCGTC
GATCCGGACG GCGCCGGCAT CTACGACATC ACCTATCGCA CGGTCGCCCC AGAGGACGGC
ACTGAACGCT GGGTGTCCGC CAAGGGTCAG ACCCTGTTCG AGGACGGGCG TCCCATACGC
CTCATCGGCA CTGCGCGCGA GGTCACCGAG AGCCGGCGGG CCGAGCAGGC CCTGCGCGAG
ACCGAGGAAC GCTACCGGCT GGCCTCGCGG GCCACCAACG ATGCGATCTG GGACTGGAAC
CTTGCCACCA ACCACGTGCT CTGGAACGAG GCGCTGAGGG TGGCTCACGG CTATACGCCC
GATGCCGTCG AGCCGACCGG TGACTGGTGG ATCGGCCACA TTCACCCCGA CGACCGCGCC
CGCATCGATG CCTCCATCCA TGCCATCATC GATGGGACGG GTACCGCCTG GAGCGATGAG
TACCGGTTCC TGCGGGCAGA CGGCTCCTAC GCCGACATCC TCGACCGCGG CTACGTTATC
CGCGACGCTC AGGGGAAGGC GACCCGCATG ATCGGGGCGA TGCTGGATAT CAGCGAGCGT
AAGCGGGCTG AGGAGCACCA GCGCCTGCTT ACGGGCGAGC TGCAGCACCG GGTCAAGAAC
ACCCTGGCGA TGGTCCAGGC GATTGCCAGC CAGACCCTTC GAGGTGCCAC CGACCTCAAC
GACGCCCGCG AGGCCTTTGC CGCCCGCCTG ATCTCGCTCG GCCGCGCGCA TGACATCCTG
ACCCAGGCGA GCTGGACGGC CGCCCCGATC CTGCAGGTGG TTCAGGGCGC ACTCAGCGTG
CACGCCCAGG TGGGTGCCGG GCGGATCCGC ATCAGCGGGC CCGACGTGCT GCTCGGCGCG
AAACCTGCAC TCTCCCTCGC GCTGGCCCTG CACGAACTGG CCACCAACGC GGCCAAGTAC
GGCGCGCTCT CGAACGAGAC CGGGGTGGTC GACCTGCGCT GGCACGTGGT GCATGAGGAC
GAAGCGCTGC GGTTCTACCT CACCTGGTCC GAGCAGGGCG GTCCACCCAT TCTCGTCCAG
CCCGCCCGCC GTGGGTTCGG CTCACGCCTG ATCGAGCGCA GCTTCGCCGC TGAAGTTGGC
GGCGAGGTCA AGCTCACCTA CGCGCCGACC GGTCTGGTCT GCCGTCTGGA GGTGCCCCTT
GCCTTGATGC AGGAGCAGCG CAGCGAGATC GCAGCGTAA
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| Protein sequence | MPWSDDPLDS VPKQSFDDVV RLAAELCQAA HAVTCLQAGG RLQVHASYSA ASASTALDPD
VCADAAVTDE LLIVPDLHEG PERMGCPRLT EGSQMRFYAA VRLQAADGTV LGVLCVLDPL
PRRKGLTPAQ QECLRSLARQ TVTLLEVRRA ARVHRTQRIL HERILDSATD YAIIATDGAG
RITRWNAGAE QILGWREEEM LGEPTQLFFT PEDREAGRLK TEMALALKDG SAPDERWHLR
KGGERFWASS ELMPLRAENG SVQGFLKILR DRTQQRVEAA ERNSSELRFR SLVEVSPQVV
WFGDAAGNIT YCNPMWCEYT GLTLGDTSGA DWASVIHPDQ QERVLEVWRH AVETGGSYEV
EIPFRRASDG QYRWFLARGR PVRDAAGLLE SWIGIAIDIH DRKEAEVALR SAQEQLRLAV
EATETGVFDY DLVADELKWD TRIRSFYGLA PDAPVDLSVH LACVHPDDHE RADKAVAAAV
DPDGAGIYDI TYRTVAPEDG TERWVSAKGQ TLFEDGRPIR LIGTAREVTE SRRAEQALRE
TEERYRLASR ATNDAIWDWN LATNHVLWNE ALRVAHGYTP DAVEPTGDWW IGHIHPDDRA
RIDASIHAII DGTGTAWSDE YRFLRADGSY ADILDRGYVI RDAQGKATRM IGAMLDISER
KRAEEHQRLL TGELQHRVKN TLAMVQAIAS QTLRGATDLN DAREAFAARL ISLGRAHDIL
TQASWTAAPI LQVVQGALSV HAQVGAGRIR ISGPDVLLGA KPALSLALAL HELATNAAKY
GALSNETGVV DLRWHVVHED EALRFYLTWS EQGGPPILVQ PARRGFGSRL IERSFAAEVG
GEVKLTYAPT GLVCRLEVPL ALMQEQRSEI AA
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