Gene Mext_1860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_1860 
Symbol 
ID5831493 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp2082035 
End bp2082358 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content66% 
IMG OID641367659 
Producthypothetical protein 
Protein accessionYP_001639330 
Protein GI163851287 
COG category[S] Function unknown 
COG ID[COG0718] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00103] DNA-binding protein, YbaB/EbfC family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00278106 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGACC TCATGGGCAT CATGAAGCAG GCCCAGGCCA TGCAGGAGAA GATGGCCTCG 
GTTCAGTCCG AGCTCGAAGC GGTCGAGGTG TCGGGCGCTT CCGGCGGCGG CGCCGTGACC
GTGCGCATGA CGGCCAAGGG TCAGGTGCTC GGCGTTTCGA TCGATCCGAG CCTGATGGTC
GCCGACGAAC GGGAAATCCT GGAAGACCTG ATCGTCGCCG CCTGCAACGA CGCCCGCGGC
AAGGCCGAGG CGACCGCCCA GGAAAAGATG GCAGAACTGA CGAAGGGTCT GCCGCTGCCG
CCCGGCATGA AGCTGCCGTT CTAG
 
Protein sequence
MRDLMGIMKQ AQAMQEKMAS VQSELEAVEV SGASGGGAVT VRMTAKGQVL GVSIDPSLMV 
ADEREILEDL IVAACNDARG KAEATAQEKM AELTKGLPLP PGMKLPF