| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1695 |
|---|
| Symbol | |
|---|
| ID | 5832950 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 1914077 |
|---|
| End bp | 1914757 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641367494 |
|---|
| Product | isochorismatase hydrolase |
|---|
| Protein accession | YP_001639165 |
|---|
| Protein GI | 163851122 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1335] Amidases related to nicotinamidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.305053 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.0828387 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCCC CGCAGCCCCT TCTCGACGCC GAACCCGCAC CCCTGCCGTT CGATCCGGCG
AGGGCGGCCC TCGTCGTCAT CGACATGCAG CGCGACTTCC TCGAGCCCGG CGGCTTCGGC
GAGAGCCTGG GCAACGACGT CTCGCTGCTC GCCGCCGCGG TGCCGCCCGC CCGCGCCCTG
CTGGCCGCCG CGCGCGCGGC CGGCCTCCTC GTCGTCCACA CCCGCGAGGG CCACGCACCC
GATCTCTCGG ACGCCCCGCC GGCCAAGCGG GAGCGCGGCG CGCCGACGGC GCGCATCGGC
GAACCGGGCC CGATGGGCCG CATCCTGATC CGCGGCGAGC CCGGGCACGA TATCATCCCC
GAACTGGCGC CCCTCGACGG CGAGCCGGTG ATCGACAAGC CGGGCAAGGG CGCCTTCTAC
GCGACCGGGC TCGCGGCTCT GCTGGAGGCG CGCGGCATCG AGACCCTGAT CGTCTGCGGC
GTGACGACGG AGGTCTGCGT GCACACCACC GTGCGCGAGG CCAACGACCG CGGCTATCGC
TGCGTCGTCG TCGCCGATGC CTGCGGCTCG TACGTTCCGG CCTTCCACGA GGCGGGCCTC
GCCATGATCA AGGCCCAGGG CGGCATCTTC GGCTGGGTCT CGCGCTCCGC CGCGGTGATC
GCCGCCCTCG GCCAGGCGTG A
|
|---|
| Protein sequence | MPAPQPLLDA EPAPLPFDPA RAALVVIDMQ RDFLEPGGFG ESLGNDVSLL AAAVPPARAL
LAAARAAGLL VVHTREGHAP DLSDAPPAKR ERGAPTARIG EPGPMGRILI RGEPGHDIIP
ELAPLDGEPV IDKPGKGAFY ATGLAALLEA RGIETLIVCG VTTEVCVHTT VREANDRGYR
CVVVADACGS YVPAFHEAGL AMIKAQGGIF GWVSRSAAVI AALGQA
|
|---|
| |