| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1690 |
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| Symbol | |
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| ID | 5831898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 1904889 |
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| End bp | 1909787 |
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| Gene Length | 4899 bp |
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| Protein Length | 1632 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641367489 |
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| Product | beta strand repeat-containing protein |
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| Protein accession | YP_001639160 |
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| Protein GI | 163851117 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR02601] autotransporter-associated beta strand repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.638042 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCCAGT CCCAAGCGAG CGCCCTGCGC GATGTCGTGC GCGCCACCTA CCGGCGCGCG
GGGCTCGACA AGTCCGAGAC CGAACTCGAG GCCCTGCTTC CCACCGTCCG GCCGCTGATC
GACTTCGATC CGCGCGAGGC CCGCGAGGCC GACATCGTCG GCCTGCTGGG CAAACTCACC
CTACGGGACG CATCCCTGCC CGCCGCGCCC GGCCCCGTGT CCCTGGTCCG TACGCTGTCG
AAGGAGCCGC TGGCTGCCTA TGGCGGCACG ACGCCCGACA TCACCACCAA GTCGGCCACG
GAACTCGCCG CCCTGCTCGC GAGCGGCACG ATCACCTCGC GGGAGATCGT GCTCCAGTAC
ATGTACAAGA TCCAGAAGCT CGACCGCGCC GGTCCGGCTC TGCGATCGGT GACGGAACTC
AACCCCGAGC TTCTGACCAT CGCCGACCGC ATGGATGCGC GCCGGGCCGA GGCCAAGGCG
AAAGGAGAGA CGCTGCCGGA CCTGTTCGGC ATCCCGATCC TCCTGAAGAA CAACATCGAG
ACCGGCGACC ATCTCCGCAC CACCGCCAGT TCGATGGCCC TGATCGGCTC GAAGCCGGCG
GACGACGCGC CCCTGGTGGC CAATCTGCGC GAGCAGGGGG CCATCATCAT GGGCAAGACC
AACATGAGCG AGTGGGCCTC CTTCCGGGGC GGGATCGCTC TCAGCGGACA GGGCGGAACC
GCCATCAACC CGTTCGGGCC CGATCGGCCG CTATACGGCT CCAGCATCGG GTCGGGCATC
GCGGTTGCCA TGGATTTCGC ACCGATCACC GTCGGGACGG AGACCAACGG CTCGATCACG
GGTCCGTCCA AGGGCTACCA CATCTGGGGT CTCAAGCTGA CGCGCGGTCT CGTGGATGGC
GCCGGCATCA TCCCGGGCGT CGCGTCGATG GATACGCCCG GCCCCATGGG ATCCAACCCG
GCCGATCTCG CCCTGCTGCT CAACGGGATG CGGGGGAGCG GGGCGTCCGG CCCCGCCAAT
CCGCCGACCG ACTACACCAG CAAGTTGAAC GGCGATCTGA CAGGTGTCAG GATCGGCGTC
GATACCACCG ACGCATCTCC GGCATTCGTG TCCCTGCTTT CGGCCGTTGC GAAAGAGTCC
GGGGCGACAT TGGTCACCTA CGACAAGGAG ACCTACGATC AGGCCGTCTA CGCGGCGGTG
CGCGGCCTCA ACACTGCGGA CATCAGCGAA CTCGTCAAAC TGTATAATGG GCTGGCGCCC
TCGACGATCG TGACCGAAGC TCAAATCGAG GCGTTTCACC AAACACTCGT TACAGATCCA
CTCAATGAAT GGATCACTGC CTATCCCCTC TGGACGACCA TATTTAATGC ATATGCAAAA
ATAGTTTCAT ACGAGCTCAG GAAGTACATC GACGAGAATC TGGGTGTGCG CGAAGCGAAT
CCTCAAGACT ACGACAGCGC CCTGGTTCGA CTGCTCGGCA CCACCTTCCG GGCCCTTGAC
GGCGACAGGG CGAGATTCGC GCGCGATCTG CCGGATGTCG TCGCGTTCAA CGCAGCGAAT
CCGGAGATCG AGAGGATCGG CTTCGGGTCC GACTTTTTCG CCAGAATCGC GACGCCGAGC
CTCGATGACC TCGTCAAGGC CGTCGGTTTC GATTCCGCCG CCGCGCTCGA CGCCGCCGCC
ATAAACTGGA AGGGGATCAT CGGGAAGATC CTACACGAGG TGAGAGCCGG TCTCGGCGTC
GATGTCTCGT TCGATACCCG GCTCGACGAG AACGCGATGG CGTTCGCAAA CTCGCCTCAG
TTGGTCGTTC CCGTCGGTCC GGGACGCAGA TCCACCGGGC AGACCATGAA CGCCGACCCG
TTCGGCGAGG AGGCGATGCT CCGGGTCGGC TACGCCCTGA ACGAGAAGCT GAACGACCCC
GCCTTCGCGA GCCTGCGCGC GCTATCCCCG TCCATCCCCG AGACGGGCTT CACCAATCAG
CCGGCCGACC GGGGCCCGCT TCTGCCGCTG GTGCTGCACG ATCTGGACGA CCACGGCCGG
GCGACGCTGG CCCATCTCCT CACCACGGAG ATGGCCCCCC TCGTGCTCCA CACCACCGGA
AAGCTCGCCC AGCCCACCTT CGACGGACGC ATCTCCGGCA ATGGCGGCCT GATCAAGGAG
GCCGACGGCG TCCAGGCCCT CACCGGCGAC AGCGACTTCA CCGGCACCGT CCAGATCTGG
AAGGGCGCCC TGGCGATCGA CCGCAACCAG GCCCTCGGCA GCGCCGCCAA CGCCGTCAGC
CTCGAAGCCG GCAGCGCCCT GATCGCCAGC CGCAGCCTCA CCCTGGCGCG CGACCTCCTC
CTGAAGAACG GCGGTGCCCT CGGCGCCGGG GCCGAGATCG CCCTGATCGC CGACGGCGTG
ATCTCCGGCA ATGGCGGCCT GACCAAGACC GGGGCCGGCC AGCTGACCCT GGCGGGCGTC
AACACCTATA CCGGCGGCAC CCGCATCGCC GAAGGCGTTC TGGCCGTCGC CGCCGATGCC
GGGCTCGGCC AGGATTACGG TGCGCTGCGC TTTGCCGCCG GCACCGGCCT GCTCGTCACC
GGCAGCTTCG CCACCCAGCG GCCGTTCCAG CTCGACGGGG AGACCCACCT CTCCATCCGG
GCCGGCGCCT CCCTGACGGT GAACAACCTC ATCGACGGCG CCGGCAGCCT CGTCCTCGAC
GGCGGCGGCA GCCTCACCCT GGCCGCGGCC GCCAACCGCT TTGCCGGCGG CATCCAGCTC
AAGGCCGGCA CCCTCGCCCT CGACGGCGCC GGCGCCGCCG GGCTCGGCAC GATCCGCTTC
GAGGCCGGGC CCCAGACCCT CGTCCTCGAC GCCGCCGCCT TCCAGGCCGG CATGTTCGGG
GGCACGATCG CCCGGTTCGG CACCGCCGAC ACGATCAGCC TGGCCGATCT CGCCTACACC
GCCGGCGCCA CCGCGCAGTA CGATCCCACC GCCCAGGCGC TGACCGTCGT CAGCGGCGGC
CTCACCCGCC AGCTCACCCT CTCCGAAGTC GGCCGCGGCG GCTTCACCCT GGCCTCCGAC
CCGGCCGGCG GCACCCGCGT CCTGCTCACC GGCGTGCCCG TCGGCCTCGC CGCCTCGGGG
CCGGGCCTCG ACGCCCAGGG CAACGGCCTG CTGAAGGCCG GGGCCGTGCT CACTTTCACC
GTCGAGATGT CCGATCTCGT CACCGTCGAG ACCGGCGCGG GCCGCCCCGT GCTGGTCCTG
TCCAACGGAG CGGAGGCGGC CTATACCGGC CAGCCGAACG GGGGGAGCCT CGGCTTCGCC
TACACCGTCG CCCCCGGACA GGACAGCCAG GCCCTCGCCG TCGCCCGGCT CGACCTGCGC
GGTGCCGTCA TCCGCGACAC CGGCGGCCAC GTGGCCGACG TGACCGCCCT TCCCGCCGCC
CCGTCGGGCA CGATCACCCT CGACACCACC GCACCGACGC TGGCCCTGAC CGCAGCACCG
CCCGCCACGG TCGAGGCGAG CTCCGCCGCG GGCGCGGCCG TGAGCTTCGC CGCCAGCGCC
GGAGACGGCG TCGATCCGGC GCCGCGCGTG GTGTTTAGGG CCGGCGACAC CGTAGTCTCC
TCCGGCCAGA CCTTCGCGCT CGGCACGCAC AGCGTCACCG CCACCGCTTT CGATGCCGCC
GGCAATGCCA GCGCCCCGGT CTCGTTCGGC TTCACCGTAG GGGACACCAC CGCGCCGACG
CTGGCCCTGA CGGCGGCACC GCCCACCACG GTCGAGGCGA GCTCCGCCGC GGGCGCGGCT
GTGAGCTTTG CCGCCAGCGC CGGGGACGGG GTCGATCCGG CCCCGCGCGT GGTGTTCCGG
TCGGGCGACA CCGTGGTGTC CTCCGGCCAG ACCTTCGCGC TCGGCACGCA CAGCGTCACC
GCCACCGCTT TTGACGCCGC CGGCAACGCC AGCGCTCCGG TCTCGTTCGA CTTCACCGTG
ACGACCCCGG TCGCGCCGGC CACGGCGAGC TTCGACTTCG CCCTGAGCCA GGCCAGCCTG
CGCCAGGCCC CGGGGCACAT CGCCCTGATC GGGCCGGACG GCCTGAGCTA CGACGTCACC
GCCGTCGAGA CCTTCGTGTT CACCGATGGC GTCGTCCGGC AGAAGGACGC CGCCCCGCTG
GTCGACGACC TGTTCTACTA CGCCGCCAAC CCCGACGTCT GGCAGGCCCA GATCGATGCC
GAGGCGCACT ATGCCGCCTA TGGCTGGCGC GAGGGCCGCG ACCCGAACGC CACCTTCTCG
ACCGGAGGCT ATCTCGCGGC CAACCCGGAG GTGGCCGCGG CCGGCCTCGA CCCGCTGGTC
CACTTCGCGC AAGCGGGCTG GAAGGAGGGC CGCGATCCCG CCGCCGGCTT CGACGTCGAA
CTCTACCTCG CCCGCCATCC GGAAGCACAG GCGGCCGGTC TCGATCCGCT CAGCCACTAC
CTCGCCCAGG GCCGGGCCGA GGGGCTGGCC GCCCATACCG CGATCGGACG CCCGGCCGAC
CTGGCCCAGC AGGGCGGCTT CGACGCGCAG GCCTATCTGC TGTCCAACCT CGACGTGGCC
GAGGCGGCCC GGGCGGCCGG GGGCGACAGC TTCGCCTTCG CCCGGACGCA CTACACGACC
TATGGCTGGC AGGAGGGGCG CAACCCGAAC GCGGTGTTCG ACACCAAGGG CTATCTCGCC
GCCTACGGCG ACGTGGCCGC GGCCGGGATC GATCCGCTCG CCCACTATGT CCGGTACGGC
GCGGCGGAGG GCCGCGACCC TTCCGCCAGC TTCGACGGCA AGGCCTACCT CGCCGCCAAC
AGTGACGTGG CCGCGGCGGG GCTGAACCCG ATGCTGCACT ATCTCCAGTA CGGCGCCGCC
GAGGGCCGCA GCGCCTTCGC CGACGGGCAC TTCGCCTGA
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| Protein sequence | MPQSQASALR DVVRATYRRA GLDKSETELE ALLPTVRPLI DFDPREAREA DIVGLLGKLT
LRDASLPAAP GPVSLVRTLS KEPLAAYGGT TPDITTKSAT ELAALLASGT ITSREIVLQY
MYKIQKLDRA GPALRSVTEL NPELLTIADR MDARRAEAKA KGETLPDLFG IPILLKNNIE
TGDHLRTTAS SMALIGSKPA DDAPLVANLR EQGAIIMGKT NMSEWASFRG GIALSGQGGT
AINPFGPDRP LYGSSIGSGI AVAMDFAPIT VGTETNGSIT GPSKGYHIWG LKLTRGLVDG
AGIIPGVASM DTPGPMGSNP ADLALLLNGM RGSGASGPAN PPTDYTSKLN GDLTGVRIGV
DTTDASPAFV SLLSAVAKES GATLVTYDKE TYDQAVYAAV RGLNTADISE LVKLYNGLAP
STIVTEAQIE AFHQTLVTDP LNEWITAYPL WTTIFNAYAK IVSYELRKYI DENLGVREAN
PQDYDSALVR LLGTTFRALD GDRARFARDL PDVVAFNAAN PEIERIGFGS DFFARIATPS
LDDLVKAVGF DSAAALDAAA INWKGIIGKI LHEVRAGLGV DVSFDTRLDE NAMAFANSPQ
LVVPVGPGRR STGQTMNADP FGEEAMLRVG YALNEKLNDP AFASLRALSP SIPETGFTNQ
PADRGPLLPL VLHDLDDHGR ATLAHLLTTE MAPLVLHTTG KLAQPTFDGR ISGNGGLIKE
ADGVQALTGD SDFTGTVQIW KGALAIDRNQ ALGSAANAVS LEAGSALIAS RSLTLARDLL
LKNGGALGAG AEIALIADGV ISGNGGLTKT GAGQLTLAGV NTYTGGTRIA EGVLAVAADA
GLGQDYGALR FAAGTGLLVT GSFATQRPFQ LDGETHLSIR AGASLTVNNL IDGAGSLVLD
GGGSLTLAAA ANRFAGGIQL KAGTLALDGA GAAGLGTIRF EAGPQTLVLD AAAFQAGMFG
GTIARFGTAD TISLADLAYT AGATAQYDPT AQALTVVSGG LTRQLTLSEV GRGGFTLASD
PAGGTRVLLT GVPVGLAASG PGLDAQGNGL LKAGAVLTFT VEMSDLVTVE TGAGRPVLVL
SNGAEAAYTG QPNGGSLGFA YTVAPGQDSQ ALAVARLDLR GAVIRDTGGH VADVTALPAA
PSGTITLDTT APTLALTAAP PATVEASSAA GAAVSFAASA GDGVDPAPRV VFRAGDTVVS
SGQTFALGTH SVTATAFDAA GNASAPVSFG FTVGDTTAPT LALTAAPPTT VEASSAAGAA
VSFAASAGDG VDPAPRVVFR SGDTVVSSGQ TFALGTHSVT ATAFDAAGNA SAPVSFDFTV
TTPVAPATAS FDFALSQASL RQAPGHIALI GPDGLSYDVT AVETFVFTDG VVRQKDAAPL
VDDLFYYAAN PDVWQAQIDA EAHYAAYGWR EGRDPNATFS TGGYLAANPE VAAAGLDPLV
HFAQAGWKEG RDPAAGFDVE LYLARHPEAQ AAGLDPLSHY LAQGRAEGLA AHTAIGRPAD
LAQQGGFDAQ AYLLSNLDVA EAARAAGGDS FAFARTHYTT YGWQEGRNPN AVFDTKGYLA
AYGDVAAAGI DPLAHYVRYG AAEGRDPSAS FDGKAYLAAN SDVAAAGLNP MLHYLQYGAA
EGRSAFADGH FA
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