| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1678 |
|---|
| Symbol | |
|---|
| ID | 5833074 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 1892754 |
|---|
| End bp | 1893407 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641367477 |
|---|
| Product | isochorismatase hydrolase |
|---|
| Protein accession | YP_001639148 |
|---|
| Protein GI | 163851105 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1335] Amidases related to nicotinamidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTTC GCAACGGCCT CGATTCGCTA CTTCGTCCCG AAGACTCCGT ACTGGTTCTG
ATCGATCATC AGCCTTACCA GCTGACGAAC CTGAACAGCC ACGATCCGCA CATGGTCGTG
AACAACACGA CCGCTCTGGC AAAATCCGCC AAGGTATTCG GCGTACCCAC CATCCTGACG
AGCGTCATCG CGGAGCGCGG CGGCGTCATC TTCCCGCAAG TCACCGATGT CTTTCCGGGC
CAGGAGGTGA TCGACAGAAC GTTCATCAAC ACCTGGGAGG ATGAGAAAGT CGTGGATGCG
GTTAAGGCGA CCGGCCGCAA GCAGTTGATC ATCGCAGGCC TCTGGACCGA AATCTGTGTC
GCGATGCCCG CGATCCAGGC CGCAGGCGAA GGCTGGGACG TCACGGTGAT CACCGACGCC
TCCGGCGGCG TCTCGGTTGA GGCTCACGAA GTCGCCATCC AGCGCATGAT CCGGGCCGGC
GTGAACATGA TGACTTGGCT GGCGCTGGCG GCCGAGTGGC AGCGCGACTG GGCCCGCCTG
GATACCGCCG TCGGTCTCAC CGAGGTGCTC AAGCAGCACG CTGCCGGCAG CGGCATCGCA
TATCTTTGGG AACAGCAGCT ACTCGCTACG CCTGTGCCGA AAGCCGCGGG CTGA
|
|---|
| Protein sequence | MKFRNGLDSL LRPEDSVLVL IDHQPYQLTN LNSHDPHMVV NNTTALAKSA KVFGVPTILT
SVIAERGGVI FPQVTDVFPG QEVIDRTFIN TWEDEKVVDA VKATGRKQLI IAGLWTEICV
AMPAIQAAGE GWDVTVITDA SGGVSVEAHE VAIQRMIRAG VNMMTWLALA AEWQRDWARL
DTAVGLTEVL KQHAAGSGIA YLWEQQLLAT PVPKAAG
|
|---|
| |