Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_1636 |
Symbol | |
ID | 5835118 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 1823929 |
End bp | 1824444 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641367434 |
Product | peptide deformylase |
Protein accession | YP_001639106 |
Protein GI | 163851063 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.171966 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.104834 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTCC GCCCCCTCGT GATCCTGCCC GACGCGCAGT TGCGCCTCAC CTCCGAGCCG GTGGCGGCCG TCACCGACGA GATCCGGACG CTTGCCCGCG ACATGATCGA GACGATGTAC GATGCCCCCG GCGTCGGCCT CGCCGCGATC CAGATCGGGG TGGCCAAGCG GGTCGTCACC ATCGACACCT CGAAGGACGA GAACGCCAAG AACCCGACCG TCTACCTCAA CCCGGAGATC GTCTGGGTGT CGGAAGAGAA GCGGGTCTAC GACGAGGGCT GCCTGTCGAT CCCCGAATTC TACGGCGAGG TCGAGCGGCC GGACCGCGTC CGGGTGCGCT ACATGAACCT CGACGGGCAG ATTGTGGAGC AGGAGGCCGA CGGCCTGCTC GCGACCTGCC TCCAGCACGA GATCGACCAC CTCAACGGCG TCCTGTTCAT CGATCACCTG TCGAAGCTGA AGCGTGACCG GGTGATGAAG AAGTTCACCA AGGCCGCCAA GCGCGACGCC GCCTGA
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Protein sequence | MTVRPLVILP DAQLRLTSEP VAAVTDEIRT LARDMIETMY DAPGVGLAAI QIGVAKRVVT IDTSKDENAK NPTVYLNPEI VWVSEEKRVY DEGCLSIPEF YGEVERPDRV RVRYMNLDGQ IVEQEADGLL ATCLQHEIDH LNGVLFIDHL SKLKRDRVMK KFTKAAKRDA A
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