Gene Mext_1616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_1616 
Symbol 
ID5834414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp1803147 
End bp1804283 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content76% 
IMG OID641367414 
ProductTonB family protein 
Protein accessionYP_001639086 
Protein GI163851043 
COG category 
COG ID 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain
[TIGR02794] TolA protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.37756 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.00492157 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCGCTC CCAAGCCAGC TCCGAAGGCC GCCCCCATGC CGCCGATGCA GGCCCCGACA 
TCTGCCCCGA TGCCGGCTCC CGTGCCCGCT CATGCCGGGC AGGGGTTGCC CTCGGGCCCG
TCCGAGGGAG GCGGCCAGGG GCGCCTCGCG GCCGCCTTCG CCCTGGCCCT GGCCCTGCAC
GCCGCGGGGC TGATCGGCAT CACCTATCTG CATCTGACAC CGCCCGCGCC GCCGGGCGAG
CAGGAGATCA CCATCGATCT CGCGCCGCAG ATGGCGGAGG CCGAGACGCA GGCCCCCGCC
CAGACAGCGC AGTCCGAGGC GATCCCCGAG GAGGCCAAGC CCGAGGGCGA GCCGGAGACG
GCCGAGCCGG TCGAGACCCC GGACGAGGTG AAGCCCCCGC CTCCCCCCGA GATGACGGAG
GTGATGCCGG AGGAGGTGCA GCCGCCGCCT CCGCCGCCAG AAGCCGTCAC GGAGGTTCCG
CCCGACACGC TGCCCCCGCC GCCGGAGGAG CAGATCATCG CCTCCGAGGC GCAGGAGGCG
GAGCCGCTGG CGCCGCCCCC GCCCGTGGTG GCGAAGGTGC CGGAGCGGCC CAAGCCCGAT
CCCAAGATCG AGGAGCGCCG CAAGGCCGCC CTGGAGAAGA AGCGCGAGGC CGAGCGCGAG
GCACGCCGCC AGGAGATCCT CGAGAAGAAG CGCGAGGAGG CGCAGAAGGA AGCGCGGATC
AAGGCCGCCA AGGCGAAGGC GGAGCGCGAT GCCGCCCGGC GCGCCCAGGC CGCGCAGGCG
GGCAATGCGC AGCGCAACTC CGCCGCGACC TCGCGTCAGA GCGCGACGGG CACGGCCGCC
GCGGCCAGCG ATCCCAACGC CATGGCCGCC TGGAAGGGCT CCATCGCCGC GACGATCCGT
GGCCGGATGA ACCGTGAGGC CGCGGCCGGC ACCAGCGGCG GCGTCGCGAC CGTGCGCTTC
ACCGTGAGCC GCTCCGGCGC GGTGAGCGGC GCGGCCGTGA CCGGCAGCAG CGGGGTGGGC
GCCATCGACA GCGCCGCGCT CGCGGCGGTG CGCGGCGGCT TGCCGCCCGC CCCCGCCGGG
GTGACGCAGC CGAGCCTCGC CGTCACCGTG CCGCTGCGCT TCAGCCCTGG GCGTTAG
 
Protein sequence
MAAPKPAPKA APMPPMQAPT SAPMPAPVPA HAGQGLPSGP SEGGGQGRLA AAFALALALH 
AAGLIGITYL HLTPPAPPGE QEITIDLAPQ MAEAETQAPA QTAQSEAIPE EAKPEGEPET
AEPVETPDEV KPPPPPEMTE VMPEEVQPPP PPPEAVTEVP PDTLPPPPEE QIIASEAQEA
EPLAPPPPVV AKVPERPKPD PKIEERRKAA LEKKREAERE ARRQEILEKK REEAQKEARI
KAAKAKAERD AARRAQAAQA GNAQRNSAAT SRQSATGTAA AASDPNAMAA WKGSIAATIR
GRMNREAAAG TSGGVATVRF TVSRSGAVSG AAVTGSSGVG AIDSAALAAV RGGLPPAPAG
VTQPSLAVTV PLRFSPGR