Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_1595 |
Symbol | |
ID | 5835010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 1777297 |
End bp | 1779531 |
Gene Length | 2235 bp |
Protein Length | 744 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641367393 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_001639065 |
Protein GI | 163851022 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.603088 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.0988814 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGTCGG TTCGCACTCT CGTCGGCGTC CGCGCCCTGC GGACGATGGC GCTGACAGGC GCCTCGTTGA TGGCCCTGAC CCTCGCAGCC GCCGCGCAAC AGGCGACGGC ACGGCTGGAG GAACTGTCGG TCGAAGGCAG CGGCCGGGGC GCCGGCGCCA CCGGCGGTCC GCCGGCCCAG CGCGGCGCCG ACGGACGCGC GGCGCCCGAG GATCCGCGCG GCCCCGTCGC CGGCTACGTC GCCACCCGCT CGGTCACCGC GACCAAGACC AACACGCCCC TGATCGAGAC GCCCCAGGCG ATCACCGTGA TCGGCCGCGA GCAGATCGAG GCGCAGGGCG CGCAGACGCT GACCCAGGCG ACGCAGTACA CCGCCGGCAT CTATTCCGGC GTCTACGGTG CCGACGAGCG CGTCGATTTC TTCACCCTGC GCGGCTTCGT GGCGAGCGAT TACGGGATCT ACAAGGACGG CCTGCAACTG CTGAACTACG GCTTCGGCAC GCTCAAGACC GAGACCTTCG GGCTGGAGCG CATCGAGGTG CTGCGCGGCC CGGCCGCGGT GCTGTTCGGC GCGGGCAACC CCGGCGGCCT CGTCAACCAG GTCACCAAGC GCCCGACGCT CGCCCCCTTC GGCTATGTCG AGATCGCCGG CGGTTCGTTC GGGCAGGTCT ACGGCGCCTT CGACGTCGGC GGCCCGGCCG ACGATTCGGG CCACCTGTTC TACCGCCTCA CCGGTATCGG TCGGCAGGGC GGCACCCAGG TCGAGGGCGC GGATTCCGAC CGCGCCTACA TCGCCCCGGC CTTCACCTGG CGGCCGGATG CCGGCACCAC CTTCACGGTG CTGACGAGCT ATCAGCGCGA TTCCACGGCT GTGACCGCGA ACTTCCTGCC CTATGCCGGC ACCGTGCGCC CCAACGCGAG CGGCCTGCGC ATCGACCGCT CCCTCAACGT CGGTGACCCG CGCATCAACA GCTTCCAGCG CGAGCAGGTC TTCGCCGGCT ACGAGTTCGA GCACGCGATC GACGACGTGT GGACCGTGCG CCAGAACTTC CGCTACTCGT TCTCGGACGC GACGCAGAAT TCGTATATCG GCCAGCTCGG CTACGCCGAC CTGCCGCAGA CGCAGCTCGC CCGCTACCAG TTCCAGTACA GCGACAAGGT CAGCCTGTTC CAGGTCGACA ACCAGGCCGA GGCCCGGTTC TCCGACGGCC TCGTCGCCCA CGACGTCCTG TTCGGCATCG ATTACAAGAA CTACTCGCTC TACGACAATC AGGCCTCGCT CTTCCCCGCG CCGAACCTGA GCATCATCAG CCCGCTCTAC GGGCAGATCG TCGGCCGGCC CCTGCCCTAT CAGGTCGATG TCAACAGCTT CCGGCAGCTC GGCTTCTACG CCCAGGACCA GATCAAGCTC ACCGACCGGC TGAGCCTGAT CGGCGGCGTG CGCTACGACA TCGCCAACAG CGACGTGCTC AAGAAGCTCG CGCCGGACAC GAGCACGTCC CGTACCGATA CGGCGCTGAC CGGCCGCATC GCGCTGCTCT ACAACTTCGA TCCCGGCATC GCCCCCTACG TCGCCTACTC GACCTCGTTC CAGCCGCAGA TCGGCTTCGA TGCCATCACC GGAGGATCGC TCTCGCCGGA TCGGGGCGAG CAGATCGAGG TCGGGCTGAA GATCGAGCCG GTCGGCGAGC GCTTCTCCCT CAACATCGCC GCCTTCGACC TCGTGCGCGA CAACCCGCCC TTCCCGGTCA TCGTCGGCTT CGGCAGCACC CAGCTCGGCA CCGTGCGCTC GCGCGGCATC GAGGGGCAGT TCGTCGCCAG CCTCGCGGAA GGGCTGAACG TCGTCGCGGC CGTGACCCAT TACGATCTCG AATACACCCG CGTCCGGGAC GCCGCACTCG GCGACCTCGT CGGCAAGACC CCGACCAACG TGCCGGAGAC CTTCGCCTCG GTCTTTGCCG ACTACACGAT CCCCCTCGGT GACTGGCGCG GCTTCGGTTT CGGCGGAGGC GTGCGCTATG TCGGGCGTTC CTATGCCGAC CAGCTCAACA ATCTGAAAGT GCCGGACTAC ATCCTGTTCG ACGCGACCGT GCACTACAAC TGGGAGCGCT GGCGCATGGC GATCACCGCC GCCAATCTCG GCGACCGCCG CTTTGTCACC TCGTGCCAGT CGGCCAATTC CTGCTTCTAC GGCGAGGCCC GCCGCGTGCT GGCGAGCGTG AGCTATCGCT GGTGA
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Protein sequence | MGSVRTLVGV RALRTMALTG ASLMALTLAA AAQQATARLE ELSVEGSGRG AGATGGPPAQ RGADGRAAPE DPRGPVAGYV ATRSVTATKT NTPLIETPQA ITVIGREQIE AQGAQTLTQA TQYTAGIYSG VYGADERVDF FTLRGFVASD YGIYKDGLQL LNYGFGTLKT ETFGLERIEV LRGPAAVLFG AGNPGGLVNQ VTKRPTLAPF GYVEIAGGSF GQVYGAFDVG GPADDSGHLF YRLTGIGRQG GTQVEGADSD RAYIAPAFTW RPDAGTTFTV LTSYQRDSTA VTANFLPYAG TVRPNASGLR IDRSLNVGDP RINSFQREQV FAGYEFEHAI DDVWTVRQNF RYSFSDATQN SYIGQLGYAD LPQTQLARYQ FQYSDKVSLF QVDNQAEARF SDGLVAHDVL FGIDYKNYSL YDNQASLFPA PNLSIISPLY GQIVGRPLPY QVDVNSFRQL GFYAQDQIKL TDRLSLIGGV RYDIANSDVL KKLAPDTSTS RTDTALTGRI ALLYNFDPGI APYVAYSTSF QPQIGFDAIT GGSLSPDRGE QIEVGLKIEP VGERFSLNIA AFDLVRDNPP FPVIVGFGST QLGTVRSRGI EGQFVASLAE GLNVVAAVTH YDLEYTRVRD AALGDLVGKT PTNVPETFAS VFADYTIPLG DWRGFGFGGG VRYVGRSYAD QLNNLKVPDY ILFDATVHYN WERWRMAITA ANLGDRRFVT SCQSANSCFY GEARRVLASV SYRW
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