| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1578 |
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| Symbol | |
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| ID | 5833771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 1758600 |
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| End bp | 1759343 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641367376 |
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| Product | alanine racemase domain-containing protein |
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| Protein accession | YP_001639048 |
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| Protein GI | 163851005 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.417677 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.0750539 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGATG AGAGCCAGAC CCCGGATCAG ATCTCGGATC AGACCCTGGA TGCCAAGCCG
CCGGTCGGCG AGGCCGATGT CGCCGCCGGG CTCGCGGAGG TGCGCACGAG CATCCGCCGG
GCGGCCGAGG ACAACGAACG CGACCCGGCC AGCGTCCACC TCGTCGCGGT CTCGAAGACG
GTGCCGGCCG AGGGCATCCT GCCGGCTTTG GAGTCCGGCC AGCGGATCTT CGGCGAGAAC
TACGTGCAGG AATCGAAGGC TAAGTGGCCG GCCCTGCGTG AGCGGTTTCC GGATGTCGAG
TTGCACCTCG TCGGCCCGCT CCAGTCGAAC AAGGCGCGCG AAGCGGTCGA GCTGTTCGAC
GTGATCCATT CCCTCGACCG GCTGTCGCTC GCCGCGGCGC TCGCCAAGGA AATCGAGCGG
AGCGGCCGGG CGCCCAAGCT TCTGATCCAG GTCAATACCG GCGACGAGAC CCAGAAGGCG
GGCGTCTCCC CCGATCAGGT CGATGTCCTG CTCTCGGAAT GCCGCGAGAC CCACAATCTC
GCGATCCACG GCCTGATGTG CATCCCGCCG GCCGAAGACC CGCCCTCCCC TCATTTCGCC
CTGCTGGCCC GCATCGCCGA GCGCCACGGC CTGCCGATCC TGTCGATGGG TATGAGCGCG
GATTTTCCGG CGGCGATCCA GATGGGCGCC AGCCATGTCC GCGTCGGCAC GGCCATCTTC
GGCCGTCGGA CGAAGCGGGC TTGA
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| Protein sequence | MMDESQTPDQ ISDQTLDAKP PVGEADVAAG LAEVRTSIRR AAEDNERDPA SVHLVAVSKT
VPAEGILPAL ESGQRIFGEN YVQESKAKWP ALRERFPDVE LHLVGPLQSN KAREAVELFD
VIHSLDRLSL AAALAKEIER SGRAPKLLIQ VNTGDETQKA GVSPDQVDVL LSECRETHNL
AIHGLMCIPP AEDPPSPHFA LLARIAERHG LPILSMGMSA DFPAAIQMGA SHVRVGTAIF
GRRTKRA
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