Gene Mext_1560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_1560 
Symbol 
ID5831773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp1740404 
End bp1741123 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content72% 
IMG OID641367358 
Productimport inner membrane translocase subunit Tim44 
Protein accessionYP_001639030 
Protein GI163850987 
COG category[S] Function unknown 
COG ID[COG4395] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.69866 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGATT CCTTCGACGC AACCACTCTG ATTTTCCTGG CGCTGGCCGT CTTCGTGATC 
TGGCGGCTGC GCTCGGTCCT GGGCCAGAAG ACCGGCACCG AGCGCTCGCC CTTCCGGCCG
GTGGAGCGCA ACCGCACCGA GCCGCCGGCC GGCCGCGGCG AGGGCGACAA CGTGGTGCGC
CTGCCCGGCG CCGACCGCAG CCCGGCGGGA GCGGCGGCGG TGCAGACCGC GGCCCGCGAC
TGGCGCGGCA TCGCCGAGCC GGGCTCGGCG GTCGCCCGCG GCCTCGAGCA GGTGGTGCAG
CTCGAACCCG CCTTCGAGCC CCGCGCCTTC CTCGAAGGGG CCAAGGGCGC CTACGAGACC
ATCGTCACCG CCTTCGCCAA GGGGGACCGC AAGACCTTGC GCGCGCTCCT CTCGCGGGAG
GTGTGCGAGG GCTTCGAGAG GGCGATCTCC GAGCGCGAGA AGCGCAACGA GACGGCGGAG
ACGACCTTCA TCTCCATCGA CAAGGCGGAG ATCGCCGCCG TCGAGGTGAA GAACCGCGCC
GCCCAGATCA CCGTGCGCTT CCTCTCGAAC CTCATCACCG CCACCCGCGA CGCGGACGGC
AAGGTGATCG ACGGCAATGC CGAGACCGGT GTCGAGGTGC CCGACGTGTG GACCTTCGCC
CGCACGCTCG GCTCGCGCGA CCCGAACTGG CAGCTCGTCG CCACCGACGC GGGCGGCTGA
 
Protein sequence
MQDSFDATTL IFLALAVFVI WRLRSVLGQK TGTERSPFRP VERNRTEPPA GRGEGDNVVR 
LPGADRSPAG AAAVQTAARD WRGIAEPGSA VARGLEQVVQ LEPAFEPRAF LEGAKGAYET
IVTAFAKGDR KTLRALLSRE VCEGFERAIS EREKRNETAE TTFISIDKAE IAAVEVKNRA
AQITVRFLSN LITATRDADG KVIDGNAETG VEVPDVWTFA RTLGSRDPNW QLVATDAGG