Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_1550 |
Symbol | |
ID | 5832489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 1731040 |
End bp | 1732464 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641367348 |
Product | Alpha,alpha-trehalose-phosphate synthase (UDP-forming) |
Protein accession | YP_001639020 |
Protein GI | 163850977 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0380] Trehalose-6-phosphate synthase |
TIGRFAM ID | [TIGR02400] alpha,alpha-trehalose-phosphate synthase [UDP-forming] |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCACGTC TGATCATCGT CTCCAACCGT GTCGCCGTAC CCGCCGAGGG TAAGGATGCG GTCTCCGCAG GGGGACTCGC CGTCGCGGTC AAGGAAGCTT TCTCCTCCTA CGAGGGGTTG TGGTTCGGTT GGAGCGGCAA CATCCGCGAC AACCCGAGCA CCGAGCCGGA ACTGATCGAC CGCGGGTCGA TCCAGTACGC CGTCCTCGAC CTGTCGCCGC AAGACCATCG CGAGTACTAC GCCGGCTTTG CCAACCGGGC GCTCTGGCCG ATCATGCATT ACCGGATCGG GCTGGGGACG TTCTCCCGCT CGGATTATGC CGGCTACCAG CGCGTCAACC AGACCTTCGC CCAGGCGCTC GCCAAATTGG TCGAGCCGGA CGACCTGATC TGGGTGCACG ACTACCACCT GCTGCCGCTG GCGAGCGAGC TGCGCGGCCA GGGCATCGCC AACCCGATCG GCTACTTCCA CCACATCCCG TGGCCCGCCG CCGACGTGTT CAACACCCTG CCCGCCAGCA ACGAGCTGCT GCGCGCCATG GCCGATTACG ACCTAATCGG ATTGCAGACC GATTCGGACG TGCAGAACCT CTCGCGCAAC TTCATCGACA CGATGCGGGC GATCCCGCTC GGCGGCGGCT CGATGATGGT GGACGGGCGG CGCACGCGAA TCCGCTCCTT CCCCATCGGC ATCGATGTCG CCAGCTTCAA GGAGGCCGCC GACAAGGCCG GCTCCAACAA GGTGGTGCGG GAGACCATGG CGGGCCTGCG CACCCGCAAG CTGCTCATCG GCGTCGATCG GCTCGACTAC TCGAAGGGCG TGCCCGAGCG CATGGAGGCG GTGGACCGCT TCTTCGCCTC GAATCCGGAT CAGCGCGGCA ACGTCGTCTA CATCCAGATC ACGCCGAAAT CCCGCAGCGA GGTGCCGGAA TACGAACAGC TCTCGCGCGA GGTGAACGAG AAGGTCGGCG ACATTAACGG CATGCTCGGC GAGCCGGCCT GGACGCCGAT CCAGTACGTC ACCAAGGCCT ATCCCCGCCC GGTCCTCGCC GGTCTCTACC GGGCCGCCCG CGTCGGCCTC GTCACGCCGA TGCGCGACGG CATGAACCTT GTGGCCAAGG AATACGTCGT CGCCCAGAGC GAGGAGGATC CCGGCGTCCT CGTCCTCTCG AAATTCGCGG GTGCGGCCCG GCAGTTGCCC GAGGCGCTGC TGGTGAACCC CTACGACCGC TTCGAGGTCG CCGAGGCGAT ACGGCAGGCG CTCTACATGC CCCGCGGCGA GCGCCTGGAG CGCTGGAAGC CGATGGCGGA CCGCATGCGG CGCGAAGACG TGGATTGGTG GGCCCGCTGC TTCATGGTGG AGCTGGAGAC CTTCCGCACC GTCGAGCGCG AGCCGCCGAG CACGACGGCG GCGGCGGCGG AGTAG
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Protein sequence | MARLIIVSNR VAVPAEGKDA VSAGGLAVAV KEAFSSYEGL WFGWSGNIRD NPSTEPELID RGSIQYAVLD LSPQDHREYY AGFANRALWP IMHYRIGLGT FSRSDYAGYQ RVNQTFAQAL AKLVEPDDLI WVHDYHLLPL ASELRGQGIA NPIGYFHHIP WPAADVFNTL PASNELLRAM ADYDLIGLQT DSDVQNLSRN FIDTMRAIPL GGGSMMVDGR RTRIRSFPIG IDVASFKEAA DKAGSNKVVR ETMAGLRTRK LLIGVDRLDY SKGVPERMEA VDRFFASNPD QRGNVVYIQI TPKSRSEVPE YEQLSREVNE KVGDINGMLG EPAWTPIQYV TKAYPRPVLA GLYRAARVGL VTPMRDGMNL VAKEYVVAQS EEDPGVLVLS KFAGAARQLP EALLVNPYDR FEVAEAIRQA LYMPRGERLE RWKPMADRMR REDVDWWARC FMVELETFRT VEREPPSTTA AAAE
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