| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1547 |
|---|
| Symbol | |
|---|
| ID | 5831379 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 1726990 |
|---|
| End bp | 1727640 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641367345 |
|---|
| Product | uracil phosphoribosyltransferase |
|---|
| Protein accession | YP_001639017 |
|---|
| Protein GI | 163850974 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0035] Uracil phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR01091] uracil phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.356534 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.150214 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGCGG AGAGCGGCGG CGCGGCACGG GTGACGGTGG TCGATCACCC CCTCGTCCAG
CACAAGCTGA CGATGATGCG CGACAGTGAC CGCTCGACCA AGGGGTTCCG CGAACTCCTC
AACGAGATCG GGATGCTGCT CGCCTACGAG GTGACCCGCG ACCTACCGCT CGAGCCGGTC
ACCATCCAGA CGCCGATTCA GCCCATGGAA GGGCGCCGGA TCGCCGGCAA GAAGCTCGTG
CTCGCTCCGA TCCTGCGGGC CGGCGTCGGC TTTCTCGACG GTATGCTCTC GCTGATGCCT
TCGGCCCGCG TCGCCCATGT CGGGCTCTAC CGCGATCCCG ACACGCTCCA AGCGGTGGAG
TATTACTTCA AGAGCCCATC GGATCTGGCC GACCGCACCG TGCTGGTGCT CGACCCCATG
CTCGCCACCG CCAATTCCGC GGTCGCGGCG GTGGAGCGGC TGAAGAGCCG GGGCGCGAAG
GATCTCCGCT TCGTCTGCCT GCTCGCCGCG CCCGAAGGGA TCGCCCGCTT CCAGGCGGCG
CATCCCGATG TGCCGGTCTG GACCGCGGCC ATCGACAGCC ACCTCAACGA CCACGGCTAC
ATCGTGCCGG GCCTCGGTGA TGCCGGCGAC CGGATGTACG GCACGCGCTG A
|
|---|
| Protein sequence | MQAESGGAAR VTVVDHPLVQ HKLTMMRDSD RSTKGFRELL NEIGMLLAYE VTRDLPLEPV
TIQTPIQPME GRRIAGKKLV LAPILRAGVG FLDGMLSLMP SARVAHVGLY RDPDTLQAVE
YYFKSPSDLA DRTVLVLDPM LATANSAVAA VERLKSRGAK DLRFVCLLAA PEGIARFQAA
HPDVPVWTAA IDSHLNDHGY IVPGLGDAGD RMYGTR
|
|---|
| |