Gene Mext_1378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_1378 
Symbol 
ID5833456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp1546630 
End bp1547727 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content70% 
IMG OID641367178 
Producthypothetical protein 
Protein accessionYP_001638850 
Protein GI163850807 
COG category[S] Function unknown 
COG ID[COG2847] Uncharacterized protein conserved in bacteria
[COG4549] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0591071 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00000407941 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTCAGACA ACCGGAACCG TCCCATGCCT CGCCTCTGCC TCAGCGCCCC GCTTCGCGCC 
GCCCTGCCGC TCGTCCTGAT CGGCTCAAGC GCTGTTCTTT GCGCCGTCTT CGGCCTCGTC
TCGCCCGCCT CGGCCCATGC CGTGCTGGAG CGCAAGGAGG CCGCGCCGAA CGCTGCCTAT
CGCGGCGTCG TCCAGATCAT GCACGGCTGC GATGGCCGGC CGACCACCCG CATCAGCGTC
ACCATCCCTG AGGGCGTGAC CGGGGCCAAG CCGATGCCGA AGCCCGGCTG GACGATCGAA
ACCGTCAAGT CGGCCTATGC CCGGTCCTAC CCGTCCTTTC ACGGACAGGT CTCGGAGGGC
GTCACGAAAA TCACCTGGAG CGGCGGCAGC CTGCCGGACG AGCAGATCGA CGAGTTCACC
TTCTTCGCCC GGATTTCCGA CGCCTTCGCG CCGGGCGCGA CGATCTACTT CCCCGTCGAG
CAGGACTGCA CCGAGGGCAG CTACCGCTGG AGCGATGTTC CGGCCGAGAA CGGAAACGCG
CAGGCCCTGA AGGCGCCGGC ACCGGCGGTG CGGATCATCG CCGCGCAAGG AACGGCGCCC
CAGGCAACGC CGACCCAAGC AACGACGACG CAGGCTTCGG CCGCCCCCGC CGCGAAAACC
GGAGCGATCG CGATCGAGAC GCCTTGGCTG CGGGCGACAC CGGGCGGCGC GAAGGTTGCC
GGCGGCTACG TGACTTTGCG CAACACCGGC ACCGAGCCCG ACCGGCTGAC GGGCGCCGCG
ATCCCCCAGG CGGGCCGCGC CGAGATCCAC TCGATGACGA CGGAGGGCGG CGTGATGAAG
ATGGCGCCCG TCGAGGGCGG TCTTGCCCTT GCGCCGGGGG CCGGCGTCGC GCTCAAGCCC
GGCGGCTACC ACCTGATGTT CCTCGACCTG AAGGACGGGC TGAAGGCGGG CGAGACCATC
GCGGGCACGC TGACCTTCGA GCGGGCCGGA ACGGTGCCGG TGACCTTCAC CGTGGCACCG
ATCGGCGCGC AAGGACCCGA CAGGCAAGGA CCCGGCGCCA CCGCGCTCGA GGCCGACGGC
CACAAGCACC ACCACTGA
 
Protein sequence
MSDNRNRPMP RLCLSAPLRA ALPLVLIGSS AVLCAVFGLV SPASAHAVLE RKEAAPNAAY 
RGVVQIMHGC DGRPTTRISV TIPEGVTGAK PMPKPGWTIE TVKSAYARSY PSFHGQVSEG
VTKITWSGGS LPDEQIDEFT FFARISDAFA PGATIYFPVE QDCTEGSYRW SDVPAENGNA
QALKAPAPAV RIIAAQGTAP QATPTQATTT QASAAPAAKT GAIAIETPWL RATPGGAKVA
GGYVTLRNTG TEPDRLTGAA IPQAGRAEIH SMTTEGGVMK MAPVEGGLAL APGAGVALKP
GGYHLMFLDL KDGLKAGETI AGTLTFERAG TVPVTFTVAP IGAQGPDRQG PGATALEADG
HKHHH