Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_1331 |
Symbol | |
ID | 5833238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 1479626 |
End bp | 1482061 |
Gene Length | 2436 bp |
Protein Length | 811 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641367124 |
Product | diguanylate cyclase |
Protein accession | YP_001638803 |
Protein GI | 163850760 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.894809 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.828271 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCACTG ATCCCGTCCC CGAGATGCGC CGCGACGGCA CGACGACATC GGACGACACC ACGACATCGA CGCAGAGCTT CAGTGCCTTG ATCAATCGGC TTCGGCGCAT CGACACGCTC GACGGGCTGC CGGCGCGCTA CAGCCTGCAG GTTCGCGCCG GATTGCTCGA CGAGACCTTG AAGCTCGCCA ACTACTCCGC TGTCACCCAC CTGATCATCG CGGTCGCGGT CGCCTACTTC TTCTGGGATT CGGCGCCGCG TGCCTATCTG CTTGGTCTGC TCGCCGTCGT CGCCGTGGTG ATCGCGGCGA CCATCTACAC GACCTGGCTC TACCAGCGCC TCTACGGCGA CGCCGTCACC GAGGTCGGCG TCGGGCGCGG CTACCGGATC TCCGCCGGGT TCGCTCTCGC GCTGGGTCTG GCCTGGGCCA CCATGCCGGT CGTGCTCTTC TGCTCAGCCA GCAGCGACGA GCGGCTGCTC GTCGTCAGTA TCGCCGCCGG CCTGATCTCG GACGCCTACG TGGTCGGGCC GCTCCTGTCG GTCTCCTATC TCTTCGCGAT CCCGGTAATC GTCGGCAGCT TCATCGGGCT GGCCCGCAGC GGCGAGCCGA TTGCTCTGAG CATCGCCGTC CTGCTCCTCG TCTACGCGAC CTTCGTCGGG GTGAGTGTCC ACCGGATGAG CCGCCTCTCG CGTCAGCGCA TCCTCGACCG CGTCCGCGTC GAGGATCAGA GCGAGACCAT CGGCCTTCTC CTCAACGAGT TCGAGGAAAA CACGAGCGAC TGGCTCTGGG AGACGAACGA AACCGGCCGT TTCCAGCACG TGTCGCCGCG GATGGCCGAC GCTCTGGGCT GCCCGATCGA GCGGCTTCAG CGCAGTTCGT TCCGGGATCT GCTCCGTGCC GGGGAGGACC GGGACGAGGA TCGGACCACC GACCTGCTCG GCCATCTTCG GCAGGGCAAG GCCTTCCATG AGTGCCTCGT CGCGATCGAG ACCCCGACCG GCCTGCGGTG GCTCGCGTTG AGCGGCAAGC CCTTCGCCGA TCAGCGCGGC ACCTTAGCGG GGTTCCGCGG CGTCGGATCC GACGTGACGC AGCGCCGGGA GGCGGACGCC CACATCGCCT ATCTCGCCAC GCGCGATCCT CTGACGGGAC TGTCGAACCG GGCCGTTTTC CACGATGTGG CGGGGGAGGC CTGCACGGCC TCCATGAGCG GAGGCCCACG CGTCCACCTG CTGTATCTCG ACCTCGACGG CTTCAAGAAG GTCAACGACA CGGCCGGCCA TTGTGCGGGT GACGACCTCC TGCGGCAGGT CGCCGACCGC CTGTGCGCCA GCGTCGATGC GAACGCGCAA GTGTTCCGCC TCGGCGGCGA CGAGTTCGCG ATCCTGCACC GCGGCCGGGA GAGCGCGGAG GCGGAAATCC TGGCCGAGGC CGTCATCGCG TCCCTGCACC GGCCTTACCT CATCGAGGGC ATGCAGGCCG AGATCGGCGT CAGCATCGGG ATCGCACGGG CACCGCAGGA CGCGACCGAG CTTCAGGACC TGATGCGGAA GGCCGACCTT GCCCTCTACA CCGCCAAGGA GGCCGGCAGG GGCCGCTGGC ATTGCTTCGA GGCCGACCTC GAACGCCGCG TCCAGCGCTG GCGGGAGCTG GACAGCGCCA TGCGGGCCGG CCTGACGAAC GGCGAGATGG AGCTGCACTA CCAGCCGCTC GTGAGCCTAC AGGACGGCGA GGTCGTGGGA TGCGAGGCGT TGCTGCGCTG GACCCGGCCC GGCCTCGGCC CCGTCTCGCC CGCCGAGCTG ATCCCGATTG CCGAGAGCAC CGGCTTCGTC ATCACGATCG GGCGCTGGGC CTTGCGGACG GCCTGTGCGG AAGCCCTGAC ATGGCCTGTG CCGATGCGGG TTGCCGTGAA CATCTCATCG ACCCACTTCC GTCTCCCCGA CTTCTTCCAG GAGGTCGAGG CGGTCCTCGA CGCGACAGGG CTCGCGCCGG AGCGGCTCGA GATCGAAATC ACGGAGTCGA TCTTCCTCGC CAACACGCCG CATGTCCTGG AAAACCTTCA GGCGCTGCGT GCGAAGGGGG TGCGGATCGC TCTCGACGAT TTCGGGACGG GCTACTCGTC GCTGAGCTAC CTGACCCAAT ACCCCGTCGA CAAGATCAAG ATCGACCGGG CCTTCGTGCG CGACCTGAGC AGCCGGCCGG AATGCCTGGC CGTGATCAAG GCGATCATGG TCATCGCGGG CGATCTCAGG ATCGACGTCA CCGTCGAGGG CGTCGAGACG GAGCAGCAGG CGGAACTGCT CCGGCTGCGG CGCTGCAACA GCGCGCAGGG CTTCCTCTAC AGCCCGGCCC GCCCCTCCGG CGAGGTCACC GGGCTGATCG AACTCATCCC CCAGGCCGTC AGGCAGGCGA GGCAACCTGT CCGGAACGTC GCCTGA
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Protein sequence | MPTDPVPEMR RDGTTTSDDT TTSTQSFSAL INRLRRIDTL DGLPARYSLQ VRAGLLDETL KLANYSAVTH LIIAVAVAYF FWDSAPRAYL LGLLAVVAVV IAATIYTTWL YQRLYGDAVT EVGVGRGYRI SAGFALALGL AWATMPVVLF CSASSDERLL VVSIAAGLIS DAYVVGPLLS VSYLFAIPVI VGSFIGLARS GEPIALSIAV LLLVYATFVG VSVHRMSRLS RQRILDRVRV EDQSETIGLL LNEFEENTSD WLWETNETGR FQHVSPRMAD ALGCPIERLQ RSSFRDLLRA GEDRDEDRTT DLLGHLRQGK AFHECLVAIE TPTGLRWLAL SGKPFADQRG TLAGFRGVGS DVTQRREADA HIAYLATRDP LTGLSNRAVF HDVAGEACTA SMSGGPRVHL LYLDLDGFKK VNDTAGHCAG DDLLRQVADR LCASVDANAQ VFRLGGDEFA ILHRGRESAE AEILAEAVIA SLHRPYLIEG MQAEIGVSIG IARAPQDATE LQDLMRKADL ALYTAKEAGR GRWHCFEADL ERRVQRWREL DSAMRAGLTN GEMELHYQPL VSLQDGEVVG CEALLRWTRP GLGPVSPAEL IPIAESTGFV ITIGRWALRT ACAEALTWPV PMRVAVNISS THFRLPDFFQ EVEAVLDATG LAPERLEIEI TESIFLANTP HVLENLQALR AKGVRIALDD FGTGYSSLSY LTQYPVDKIK IDRAFVRDLS SRPECLAVIK AIMVIAGDLR IDVTVEGVET EQQAELLRLR RCNSAQGFLY SPARPSGEVT GLIELIPQAV RQARQPVRNV A
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