| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1287 |
|---|
| Symbol | |
|---|
| ID | 5834470 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 1427821 |
|---|
| End bp | 1428711 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641367079 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_001638759 |
|---|
| Protein GI | 163850716 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.100638 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCCGG GATTCCTCGA CCTCGAACTG ATCGCGATGC AGCTCTTCTC GGGCGTGGCA
CTCGGTGCCG TGTTCGTGAT GCTGGCGCTC GGCCTGTCGA TCATCTTCGG CATGCTCGGC
ATCGTGAACT TCGCCCACGG CAACGTCTTC ATGGTCGGCG CCTATGCGGG CGTGTTCGTG
ATGGAGCGCA CGGGCTCCTT CTGGGCCGCG CTGCTGTTCG GGCCGCTGAT GGTCGGGGCG
CTCGGCCTCC TGATCGAACG CTTCCTGATC CGGCCGCTGG CCGGGCGCTC GCCGGACGAT
CCGCTGCTGC TCACCTTCGG GCTCGGCTAC GTGCTGGTGG AGGGCGTGCG CATCCTGTTC
GGTTCGGATG GCCTGCCCTT CGCCACGCCT GAGGAACTCT CGGGGGTGGC CGATCTCGGC
ATCGGCTTCT TCCCGATCTA CCGGCTGTTC GTGGTCGGCG TGGTGGCGCT GGTCCTCGTC
GCCCTCTGGT ACGGGCTCGA GCGCACGCGA CTCGGCCTGA TCGTGCGGGC CGGCGCCCGC
GACCCCGAGA TCCTGCGGGT GCTCGGCGTC GATATCCAGC GGCTCTGGCT CTGGGTGTTC
GCGCTCGGCA TCGCGCTGGC CGCGCTCGGC GGCGTGCTCG CCGCACCGAT GCGCTCGGTC
AATCCGGAGA TGGGCAACGT CGTGCTGGGC GAAGCCTTCG CCGTCACGGT GATCGGCGGG
ATGGGCTCGC TGATGGGATC GGTCGTGGCC GGGCTGCTCG TCGGCATCGT GGTCTCGATG
ACCGCGCTCT TCGCCCCCGA GATGGCGAGC ATCGCGATGT TCGCCTTCAT GGCCCTGGTT
CTGCTGGTCC GGCCGCAGGG CCTGTTCGGC AAGCCCGGCC TCGGCGTCTG A
|
|---|
| Protein sequence | MDPGFLDLEL IAMQLFSGVA LGAVFVMLAL GLSIIFGMLG IVNFAHGNVF MVGAYAGVFV
MERTGSFWAA LLFGPLMVGA LGLLIERFLI RPLAGRSPDD PLLLTFGLGY VLVEGVRILF
GSDGLPFATP EELSGVADLG IGFFPIYRLF VVGVVALVLV ALWYGLERTR LGLIVRAGAR
DPEILRVLGV DIQRLWLWVF ALGIALAALG GVLAAPMRSV NPEMGNVVLG EAFAVTVIGG
MGSLMGSVVA GLLVGIVVSM TALFAPEMAS IAMFAFMALV LLVRPQGLFG KPGLGV
|
|---|
| |