| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1258 |
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| Symbol | |
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| ID | 5831638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 1393039 |
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| End bp | 1394394 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641367051 |
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| Product | sigma-54 factor interaction domain-containing protein |
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| Protein accession | YP_001638731 |
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| Protein GI | 163850688 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.438925 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCCTG AGGCCGAGCC AGCCGCCGCG CGGGTCGTGC TGATCGACGA CGAGGAGATG
GTTCGGCTCG CCATGGAGCA GGCGCTGCAG CTTGCCGGCA TTGCGGTCGA GGCTTTTTCC
AGCGCCGAGG CGGCGCTGCC GGCTATCGGG CGCGGCTTTT CCGGCATCGT CGTGAGCGAC
GTACGTCTTC CGGGCCGCGA CGGGCTCGAA CTCCTCGCCG ACATCCGCCG CCGCGACCCC
GAATTGCCGG TGGTGCTCGT CACCGGCCAC GGCGACATTG CCATGGCGGT CGCCGCCATG
CGCGAGGGCG CCTACCACTT CATCGAGAAG CCGTTCGTCA ACGATGCCTT CGTCGAGGTG
GTCCGCCGCG CCTTGGAGAA GCGGGCGCTG GTGATGGAGA ATCGCCGCCT GCGCGATGCC
CTCGATCGCG GCGACGCGCC GGGCAGCGCG GTGGAGCGCT GCCTCGTCGG CCAGTCGCCG
GCCTTGCGGC GGCTGCGCGA CGACATCGCC TCGCTCAGTT CGGCCGCCGC CGACGTGCTG
GTGCTCGGCG AGACCGGGGC GGGCAAGGAG CAGGTCGCCC GTGCCCTGCA CGAGGGCGGC
GCGCGCGCGG CGAAACCCTT CGTGGCGATC AATTGCGGCG CCATCCCCGA GAGCATGTTC
GAGAGCGAGA TGTTCGGCCA CGAGGCCGGC GCCTTCACCG GGGCGGGCAA GCGCCGCATC
GGCAAGGTCG AGCACGCGAG CGGCGGCACG CTGTTCCTCG ACGAGGTCGA GAGCATGCCG
TTGGCGCTCC AAGTGAAATT GCTGCGCGTG TTGCAGGAGC GGCGCGTGGA ACGGCTCGGC
TCCAACACCA GCGTGCCGGT GGATCTCCGG GTGGTGGCGG CCACGAAGGA GGATCTCGAT
GCACTCTCGG AAGCGGGCCG CTTCCGCCGC GACCTGTTCT TCCGCCTCAA CGTGGTGACG
CTGACCCTGC CCCCCTTGCG CGAGCGTCGC GAGGACATCC CGCTGCTGTT CGAGCGCTTT
CTCGTCCAGG CGGCGGTGAA GTACCAGCGC CCGGTGATCG AGGTGCCGCC GTCGTTGCGC
CGCTCGCTGA TGCTCGCCGA TTGGCCGGGC AACGTGCGCG AACTCAAGAA CGCCGCCGAG
CGCTACGTCC TCGGCTTCCT CAGCCCGGAC CTCGCCGGCG GCCCCGGCGC GGCGCCGAGC
CTCGACGCCC TGCTCGACCG GGTGGAGCGC CTCGTGATCG AGGATGCGCT CAAGGCTTCC
GGCCAGCGGA TCGCCGAGGC GGCGCGGACG CTCGGCCTGC CGCGCAAGAC GCTCTCCGAC
CGCATGCGGC GTCTCGGCTT GAGCGCGGGC GATTGA
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| Protein sequence | MFPEAEPAAA RVVLIDDEEM VRLAMEQALQ LAGIAVEAFS SAEAALPAIG RGFSGIVVSD
VRLPGRDGLE LLADIRRRDP ELPVVLVTGH GDIAMAVAAM REGAYHFIEK PFVNDAFVEV
VRRALEKRAL VMENRRLRDA LDRGDAPGSA VERCLVGQSP ALRRLRDDIA SLSSAAADVL
VLGETGAGKE QVARALHEGG ARAAKPFVAI NCGAIPESMF ESEMFGHEAG AFTGAGKRRI
GKVEHASGGT LFLDEVESMP LALQVKLLRV LQERRVERLG SNTSVPVDLR VVAATKEDLD
ALSEAGRFRR DLFFRLNVVT LTLPPLRERR EDIPLLFERF LVQAAVKYQR PVIEVPPSLR
RSLMLADWPG NVRELKNAAE RYVLGFLSPD LAGGPGAAPS LDALLDRVER LVIEDALKAS
GQRIAEAART LGLPRKTLSD RMRRLGLSAG D
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