Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_1179 |
Symbol | |
ID | 5832123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 1299020 |
End bp | 1300051 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641366972 |
Product | hypothetical protein |
Protein accession | YP_001638652 |
Protein GI | 163850609 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.983645 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.0540579 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCATCCG GACCCAGCCC TTCTCTGACA TATAGAACCT TCGTCGAGCT CAACCCCACC GACGCTTCGA CGAGCAGTTT CAGGGTCGGC GTCGTCGATC CGCAGAGAGC CAACGCCCCG AACGCTCCCA CTTTCGTGGT CACCGATAGT GGTAACAGTG GCATTTTAGG CGATACTCCC GGAGAGGCTG CGAATATCAC GACAACTCCG CCAAATTATT TCAGCGCGCA ACGAGAGTAT AGTTATTGGG GAAAATCTCA GGATGATGGG ACCATCGTTC GGTTCCCTTC CGCCAGAAGT GCGGATGGAT TCACTTATTT TCTGCTGACG AACAGCGACC CATCTTCATT TAGGCAATTT GACGTCGTCC CAAGTTCCGA TTTCACGCAG GCGCCTCTCG TTCTCTGTTT CGCGTCCGGT ACGCGGATCC TAACGAGCCG CGGTGAAGTG GCGGTCGAGC ATCTGCAGGT CGGCGACACC GCCGTCACCG CCTCCGGCCG CCATCGCCCG ATCACCTGGA TCGGCCAGCG CGACCTTGGC AGCGCCGAGC AGTCGATGCC CCGCGATCAG GCCCCCGTCC GGGTGCGCGC CGGTGCGTTC GGGCATGCCC TGCCCACCCG CGACCTTCTC CTCTCCCCAG GCCACCCCGT CCTGGTCGGA GCCGATGCCG ACAACGCAGG CGGCGTGCTC GTGCCGGTGA TGTGCCTGAT CAACGGCACC TCCATCGCCC GCACCGAGGT GGCCAGCGTC ACCTACTGGC ACGTCGAACT CGACGCCCAC GACATCCTCC TCGCCGAGGG CCTGCCCGCG GAAAGTTTCC TCGATTTCGG CACCCGCCCC TGGTTCGACG GGGCAACCGG CGCGCTGGTC AATCCTGATT TCATCGGGCG CGAGATGAGG GGCCGCTGCC GCCCGGTGGC GGTGGATGGC CCGGTCGTGG AGAGGGAGCG GATGCGACTC GCTGCCGTCT TCACCGTGAC TTTGGATTCC CAGTGCGGCT GGGAGGGGAC CGAGACCTGG ATCACCCCGT AG
|
Protein sequence | MSSGPSPSLT YRTFVELNPT DASTSSFRVG VVDPQRANAP NAPTFVVTDS GNSGILGDTP GEAANITTTP PNYFSAQREY SYWGKSQDDG TIVRFPSARS ADGFTYFLLT NSDPSSFRQF DVVPSSDFTQ APLVLCFASG TRILTSRGEV AVEHLQVGDT AVTASGRHRP ITWIGQRDLG SAEQSMPRDQ APVRVRAGAF GHALPTRDLL LSPGHPVLVG ADADNAGGVL VPVMCLINGT SIARTEVASV TYWHVELDAH DILLAEGLPA ESFLDFGTRP WFDGATGALV NPDFIGREMR GRCRPVAVDG PVVERERMRL AAVFTVTLDS QCGWEGTETW ITP
|
| |