| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1161 |
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| Symbol | |
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| ID | 5834510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 1272280 |
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| End bp | 1274043 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641366954 |
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| Product | type I secretion system ATPase |
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| Protein accession | YP_001638634 |
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| Protein GI | 163850591 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4618] ABC-type protease/lipase transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR01842] type I secretion system ABC transporter, PrtD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.873156 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATC GTGTGGCCGA GTCCGTCTTG AAGGATGGGC TGCGGGCGAT CCGCCCCGTT
TTGGTGACGG TGTTCGTCTT CGCCTTCTTC ACGAACCTGC TTCTGTTCGC CGGCCCCCTG
TACATGCTGC AGGTCTACGA TCGCGTCCTC TCGAGCCGGA ACGAGGCGAC GCTCCTCGGC
ATCACGGGCA TCGCCGCCTT CGCGCTCGCC GTCTATGCCG TCCTCGAAAT GCTTCGTTCG
CGCCTGTTGG TGCGGGGCGG GATGATCTTC GATCGAAAGG TTGCCGGACC GGTCTTCGAG
ATCGTTCACA GGGCCGCATT GCTCAGGCCG CGCGCCGGGC ACGAAACGGT CCTTCGCGAT
GTCGATGTCC TGCGTGAGTT CCTCACGGGC GGCGCAATCC TGGCGCTCTG CGACCTGCCC
TGGGCCTCGC TGTTCCTGAT GGCCTGCTTC ATCCTCCATC CATGGTTCGG CTGGATGGCG
TTGCTTGGGG GCGGCACGCT CCTGGGACTC ACGCTCCTGA CCGATCTCAC GACCCGGCGG
CCCCTCGACG TGGCGAGCCA AGCCGCCCGA GAAGCGGGCG AGCAGGCCCG CGCGACCATG
CGAGGGGGCG AGGTTCTGCG CGCCATGGGC ATGCTCGGCG CCTTGCGGTC CCGGTGGCAT
CGGCGTCACG ACGAGGCGAT TCGGCTGCAG GCCCGGGCGA GCGATCGCGC CGGCCTCATC
ACTGCGGCGA CGAAGTTCAC GCGCATGTTC CTGCAGACGA TGGTCCTCGG TGTCGGCGCC
TACCTCGCCA TCCATGGCGA GATCTCTGCC GGCTCGATGA TCGCGGCCTC CATCATCATG
GGCCGAACGC TGGCGCCCAT CGAGGCGGTC GTCGGGCATT GGAAGAGCTT CACGGCGGCC
CGGCGCAGCT ATGCCCGGCT GGCGGACATC GTGGGGCGCA TCGGCCTCGA ACCGCAGCGC
GTGATGCTGC CGCGTCCGCG CGGTCTGATC GAGACCGAGA ATTTGGTCGT GGCGGCGCCG
GGCTCGCCGA CGGCCATTCT CCACGATGTG AGCGTGCGGC TGGAGCCCGG CAGCGTCGTC
GGAATCATCG GTCCGAGTGC GGCCGGGAAA TCGACCCTGG TCCGCGCGAT CACCGGCGTC
TGGCCCATCA CCTCCGGCGC GGTGCGCATC GACGGAGCCG ACCTCCGGCA CTGGGACCCG
CAGGCGCTCG GCCGGCATCT CGGATACCTG CCGCAGGACG TTGAATTGTT CGACGGCACG
GTGGCGCAGA ACATCGCGCG CTTCGACACC CAGGACGACG CCGCCATCGT TGCGGTGGCG
CAACGCGCGG GCTGCCACGA CCTGATCCAG GCTCTGCCGG ACGGCTACAA CACCCGGATC
GGATCGGGCG GGCACGGCCT CTCCGGCGGC CAGCGTCAGC GCATTGCCCT GGCGCGGGCG
ATGTACGGGG ACCCGAGCTT GGTCGTCCTC GACGAGCCGA ATGCCAGCCT CGACCAAGCC
GGCGAGGCCG CGCTGATGCG GGCGGTGGCG GACCTTCGAG AGCGGGGGAC GACGGTTGTG
ATCGTCACGC ACAAGGTGGG CCTGCTGGCG GGCGCCGATC AGATCCTGAT GCTGGAGGGC
GGAACGCTCC GCGCTTCGGG CCCGGCGGAT CAGATCCTCA CCCAGGTTTC CGGGCCGCGC
CCGGTTCCGG CGCTGGTCGC GACCGGCGGT CGCGCGATGC CCGAGAACGA GAGGCTGCCC
GAAATCCAAC GTAGCGCGGG CTGA
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| Protein sequence | MSDRVAESVL KDGLRAIRPV LVTVFVFAFF TNLLLFAGPL YMLQVYDRVL SSRNEATLLG
ITGIAAFALA VYAVLEMLRS RLLVRGGMIF DRKVAGPVFE IVHRAALLRP RAGHETVLRD
VDVLREFLTG GAILALCDLP WASLFLMACF ILHPWFGWMA LLGGGTLLGL TLLTDLTTRR
PLDVASQAAR EAGEQARATM RGGEVLRAMG MLGALRSRWH RRHDEAIRLQ ARASDRAGLI
TAATKFTRMF LQTMVLGVGA YLAIHGEISA GSMIAASIIM GRTLAPIEAV VGHWKSFTAA
RRSYARLADI VGRIGLEPQR VMLPRPRGLI ETENLVVAAP GSPTAILHDV SVRLEPGSVV
GIIGPSAAGK STLVRAITGV WPITSGAVRI DGADLRHWDP QALGRHLGYL PQDVELFDGT
VAQNIARFDT QDDAAIVAVA QRAGCHDLIQ ALPDGYNTRI GSGGHGLSGG QRQRIALARA
MYGDPSLVVL DEPNASLDQA GEAALMRAVA DLRERGTTVV IVTHKVGLLA GADQILMLEG
GTLRASGPAD QILTQVSGPR PVPALVATGG RAMPENERLP EIQRSAG
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