| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1138 |
|---|
| Symbol | |
|---|
| ID | 5834424 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 1245379 |
|---|
| End bp | 1246221 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641366933 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001638613 |
|---|
| Protein GI | 163850570 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2326] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.923086 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACGATA TCGAGCAGGT CATACCGACC ACGAAGCCCA ATGCAGGTCG GCCCCAGGCG
GGGACCGCCA AGAAGCTCAA GAAAAAGGAC TACGAGAGGG AATTGCACAC CCTACAGGTC
AAGCTGTGCC ATTTGCAGGA CTGGGTCAAG CGAACCGGCG CCCGCATCAT CATCGTGTTC
GAGGGCCGCG ATGCGGCCGG CAAAGGCGGG ACGATCAAGG CCATCACCGA GCGGGTCAGC
CCGCGCGTGT TCCGCGTCGT CGCGCTGCCG GCACCAACGG ACCGGCAGAA GTCCCAGATG
TTCATCCAGC GCTACATCGA GCATTTCCCG GCGGCCGGCG AGATCGTGAT CTTCGACCGG
AGCTGGTACA ACCGGGCGGG CGTCGAGCGC GTCATGGGCT TCTGCAACGA CGCGGAGTAT
CGCCGGTTCC TCGACCTCTG CCCGCGGATC GAGCGCTTCA TCGTCGATGG TGGGACCCAG
CTCATCAAGT TCTGGCTGGA GGTTGGAAAG CAGGAGCAGA AGCGGCGCTT TCTGGCACGG
ATCGAGGATC CCCTCCGGCA GTGGAAGCTG AGCTCGATGG ACCTCGAATC CTACGAGCGC
TGGTACGCGT TCTCGAAGGC GCGCGACGCG ATGCTGGCGG CCACCGACAC TGACGACGCT
CCCTGGCACA TCGTCCGCTC CGACGACAAG CGGCGGGCGC GCCTCAACTG CATCACTCAC
CTCCTCCGCC TGATCCCCTA CAGGGAACAG AAGCACGATG CGGTGATGCT GCCGAAGCGC
AGCAAGGAGG ATGCGTACGA CGATACCCTC AGGAACAGGC GCTTCGTCAC CGAAAGGTAC
TGA
|
|---|
| Protein sequence | MHDIEQVIPT TKPNAGRPQA GTAKKLKKKD YERELHTLQV KLCHLQDWVK RTGARIIIVF
EGRDAAGKGG TIKAITERVS PRVFRVVALP APTDRQKSQM FIQRYIEHFP AAGEIVIFDR
SWYNRAGVER VMGFCNDAEY RRFLDLCPRI ERFIVDGGTQ LIKFWLEVGK QEQKRRFLAR
IEDPLRQWKL SSMDLESYER WYAFSKARDA MLAATDTDDA PWHIVRSDDK RRARLNCITH
LLRLIPYREQ KHDAVMLPKR SKEDAYDDTL RNRRFVTERY
|
|---|
| |