Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_1083 |
Symbol | |
ID | 5832280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 1181602 |
End bp | 1182261 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641366877 |
Product | NADH (or F420H2) dehydrogenase, subunit C |
Protein accession | YP_001638558 |
Protein GI | 163850515 |
COG category | [C] Energy production and conversion |
COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
TIGRFAM ID | [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.0768548 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGGCCA TCACCACCAA CGGCATCACG CTTCGCCGCA CCGTCGCGGC CGTCCAGGGC GAGGACGCCC TGCGGGCCAT GGGCGAGCGG ATCGCCGGAG CGCTCGGCCC GGCGGTCACC GAATGGGCCA TCACCCGCGG CGAGCTGACG CTCGTCGTCC AGGGCAGCGA CATCGTCTAC GCGCTGACCT ACCTGCGCGA TGAGCCGGCC TGCGCCTTCC GCTGCTTCAT TGACATCTGC GGCGTCGACT ACCCACAGCG GGCACGCCGC TTCGACGTCG TCTACCACCT GCTCTCCCTG CGCCATAACA TGCGGGTACG GGTAAAGGTG CAGACCGACG CCGCGACTCC GGTGCCCTCG GCGATTCCGG TCTTCCCGGC GGCCAACTGG TACGAGCGCG AGACCTACGA CCTCTACGGC ATCCTGTTCT CGGGCCATCC CGACCTGCGC CGGCTGCTCA CCGATTACGG CTTCGAGGGC CATCCACTGC GCAAGGATTT CCCGCTGACC GGCTTCGTCG AGGTCCGCTA CGACCAGGAC GAGGCGCGCG TCGTCTACGA GCCGGTCAAG CTGACCCAGG AGTTCCGCAA CTTCGACTTC CTGTCGCCGT GGGAGGGCAC GGACTACGTG CTCCCCGGCG ACGAGAAGAC GTCGAGCTGA
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Protein sequence | MEAITTNGIT LRRTVAAVQG EDALRAMGER IAGALGPAVT EWAITRGELT LVVQGSDIVY ALTYLRDEPA CAFRCFIDIC GVDYPQRARR FDVVYHLLSL RHNMRVRVKV QTDAATPVPS AIPVFPAANW YERETYDLYG ILFSGHPDLR RLLTDYGFEG HPLRKDFPLT GFVEVRYDQD EARVVYEPVK LTQEFRNFDF LSPWEGTDYV LPGDEKTSS
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