Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_1081 |
Symbol | |
ID | 5832278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 1179143 |
End bp | 1180381 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641366875 |
Product | NADH-quinone oxidoreductase, E subunit |
Protein accession | YP_001638556 |
Protein GI | 163850513 |
COG category | [C] Energy production and conversion [S] Function unknown |
COG ID | [COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit [COG3743] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01958] NADH-quinone oxidoreductase, E subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.320932 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAACC GCAGGCTAGC CCCCGCCGCC GAGCAGCCCC AGGATTTCGC GTTCACGCCC GAGAACGCTG ACTGGGCGCG CGGCCAGATC GCGAAATATC CGGAGGGCCG GCAGGCCTCC GCCGTCATCC CGCTGCTGTG GAAGGCGCAG GAGCAGAATG GCGGCTGGCT GCCGCAGAAG GCGATCGAGG CGGTCGCCGA CGAACTCGGC ATGCCGCATA TCCGCGTACT CGAAGTCGCG ACCTTCTACA CGATGTTCGC CCTGGAGCCG GTCGGCCGGT TCTGGATTCA AGTCTGCGGC ACCGTGCCCT GCGATTGCTG CGGGGCGAAG GAGCTGAAGG CTTCGCTCCA CGAGCGCCTC GGCCCCTCGG GAAAAGTGAC GGCGGACGGC AACTTCTCCT GGCTCGAAGT GGAATGCCTC GGCGCCTGCT GCAACGCGCC GATGGTGCAG ATCAATCAGG ACTATTACGA GGATCTGACG CCCGAGAGCC TGAACAAGCT CATGGACGAC CTCGCCGCCG GCCGCCCCGT GAAGGTCGGT TCGCAGATCG GCCGGGTTTC CTCCGAGCCG AAGGATGCGG TCAACACCCT AACCGACGAG AGCCTGTTCG ACGGCTCCCG CGTCGGCGCC TGGCGCAAGC GCTTCGAGCA GACCGAGGGC GCGGACCAGG GCGGGGAAAG CGTCAAGAAG GACGAGGCCG CCTCGACCGA GGCCCGCGTC AAGGATGAGA CCAAGCCGGC CCGTCCGTCG GCCGGGCGCG CCAACGAGTC GAACGCCGTC GATGCGCCCG CCGAGCGGGC AAGCGCCGGT CAGACTCCGG TGAAGCCCGA GGACGAGGCG CAGGCCCGCG ACGCGAAGGC GTCCCCCAAC CTGGACCCGG CCGTCGTGGA GGACAAGGTC CTTCGCACGG AGCCGCCGCA GCATCCGGCG ACGGTCGGTG CCGGTGACGA CGTGCCCGAG GGCGAAAACC CGGAGGCTCG CGCCGACGCC GCGGGCACCC GGCCGAAAGG TCTCGATACC CCGCGCGACG ACCGTCCGGA CGACCTGACC ATGATCAAGG GCATCGGCCC GATTAACCAG CGCCGTCTCA ACGATCTCGG CGTCTGGCAC TACGATCAGG TCGCCGCCTG GTCGCCGCCG GAAGTTGCCT GGGTGAGCGC CTACCTCGCC TTCCCGGGAC GGATCGACCG GGAAAACTGG GTCGGACAGG CGTCCGATCT CGCCGGCAGC AGGGGCTGA
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Protein sequence | MANRRLAPAA EQPQDFAFTP ENADWARGQI AKYPEGRQAS AVIPLLWKAQ EQNGGWLPQK AIEAVADELG MPHIRVLEVA TFYTMFALEP VGRFWIQVCG TVPCDCCGAK ELKASLHERL GPSGKVTADG NFSWLEVECL GACCNAPMVQ INQDYYEDLT PESLNKLMDD LAAGRPVKVG SQIGRVSSEP KDAVNTLTDE SLFDGSRVGA WRKRFEQTEG ADQGGESVKK DEAASTEARV KDETKPARPS AGRANESNAV DAPAERASAG QTPVKPEDEA QARDAKASPN LDPAVVEDKV LRTEPPQHPA TVGAGDDVPE GENPEARADA AGTRPKGLDT PRDDRPDDLT MIKGIGPINQ RRLNDLGVWH YDQVAAWSPP EVAWVSAYLA FPGRIDRENW VGQASDLAGS RG
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