Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_1078 |
Symbol | |
ID | 5832766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 1174695 |
End bp | 1175717 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641366872 |
Product | NADH dehydrogenase subunit H |
Protein accession | YP_001638553 |
Protein GI | 163850510 |
COG category | [C] Energy production and conversion |
COG ID | [COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.425523 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCTTCT GGGAAGTGCT CGGCACCGTC CTCCTGATCG CGTTGAAGAG CTTCGTGCTC CTCGCCGCGC TCCTCGTCTT CATCGCCTAC GCGCTGCTGG CCGACCGCAA GATCTGGGCG GCGGTGCAGT TGCGCCGCGG CCCGAACGTG GTCGGGCCCT GGGGCCTGTT CCAGTCCTTT GCCGACCTGC TGAAGTTCGT GCTGAAGGAG CCGGTGATCC CGGCGGGCGC CAACAAGGCG ATCTTCCTGC TGGCGCCGCT GGTCTTCGCG ATGCTGGCGC TGGCGTCCTG GGCGGTGATC CCGCTCGCCG ACGGCTGGGC GATCGCCGAC ATCAATGTCG GCATCACCTA CATCTTCGCG ATCTCCTCGC TCGGCGTCTA CGGCGTCATC ATGGGCGGCT GGGCCTCGAA CTCGAAATAC GCCTTCCTCG GCGCGCTCCG CTCGGCGGCG CAGATGATCT CCTACGAAGT CTCGCTCGGC TTCGTCATCA TCTGCGTGCT GCTCTGCGCC GGCTCACTCA ACCTCTCGCG CATCGTCATG GCGCAGGACA CGGCGCTCGG CCTGTTCGGC TGGTACTGGC TCTGGCTGTT CCCGATGTTC GGCGTGTTCT TCGTCTCGGC TTTGGCCGAG ACTAACCGCC CGCCCTTCGA CCTGCCGGAG GCCGAATCGG AACTCGTGGC GGGCTACATG GTCGAGTATT CCTCGACGCC GTACCTGCTG TTCATGCTCG GCGAGTACGT GGCGATCATG ACCATGTGTG CGCTCGGCAC GGTCCTGTTC CTCGGCGGCT GGCTCTCGCC GATCCCGTTC GTGCCCTTCA CCTGGGTGCC CGGCGTGATC TGGTTCACGC TCAAAGCCAG CTTCCTGTTC TTCATGATCG CCATGGTGAA GGCCATGGTG CCCCGCTACC GCTACGACCA GCTCATGCGG CTCGGCTGGA AGGTCTTCCT TCCGCTGTCC CTGATCTCGG TCATCGTCGT CGCCTTCGTC CTCAAGCTCA CCGGCCTCGC GCCGGGAGCC TGA
|
Protein sequence | MTFWEVLGTV LLIALKSFVL LAALLVFIAY ALLADRKIWA AVQLRRGPNV VGPWGLFQSF ADLLKFVLKE PVIPAGANKA IFLLAPLVFA MLALASWAVI PLADGWAIAD INVGITYIFA ISSLGVYGVI MGGWASNSKY AFLGALRSAA QMISYEVSLG FVIICVLLCA GSLNLSRIVM AQDTALGLFG WYWLWLFPMF GVFFVSALAE TNRPPFDLPE AESELVAGYM VEYSSTPYLL FMLGEYVAIM TMCALGTVLF LGGWLSPIPF VPFTWVPGVI WFTLKASFLF FMIAMVKAMV PRYRYDQLMR LGWKVFLPLS LISVIVVAFV LKLTGLAPGA
|
| |