| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_1023 |
|---|
| Symbol | |
|---|
| ID | 5831516 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 1115219 |
|---|
| End bp | 1117312 |
|---|
| Gene Length | 2094 bp |
|---|
| Protein Length | 697 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641366818 |
|---|
| Product | peptidase M23B |
|---|
| Protein accession | YP_001638499 |
|---|
| Protein GI | 163850456 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.490188 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGCGCG AGCGACTGAA GATCGGGGGA ACGGCGGCGA CGGCGAAGCC ACGCCCGCCG
ACTCTGCCGC GCGGCGTCGA GCCGCCTCTG AACCTCCTGG GTGCGGATGC CCGGCAGATC
GACCGGCGCG ACGTCAACCT GCGCTGGCTC TGCGCCAGCG CGCTCACCGG CATTACGGGC
GCGCTGCTGA TGGGCGCGGC CATCCATGTC TCCCTTCAGG GCGACGCATC GCTCGCGGCG
GTCTCGGATC GGCCGAACCT CGGACCCCGT CCGCAGACGC AGGCCCCCGC CATCGAGGAG
CCGGGGATTG CCTCCGCGCA TAAGGGTGAC CGCCTCGTCC GCAATCTGAT GATCGCTTCG
GCCAAGCAGA GTTATCGCAC CCCGGTGACG GTGCGTCTTG GCGACCGGGA GATCATCAAG
GTCCGGCCCT TCGTCCGGAT TTCGTCCAAC CTGTCGATGT CGACAGGCGT GTTCGCCAGC
GACATTCCGC GCTTCGATCC GATGAAGTTC GTCTCTGACG AGCCACAGGA GCGCGCGCCC
GATCCCGGCG CGGCGGACGC GCCGGGCGCC GAAGTTACGG TGGTGAAACG CGATCTTGCC
GAGATCGCCG TCGATCCCGG CGCAACCGCG CTGTCGGACG AGGACGTGAC GGCGCAGATC
GAGGAGGAGC GGCGCCTCGC GGCGGAAGCC GGGCGCCGCA CCGCCCTGCC GCTGGCGCCC
CAGATCCTGC TCTCGCGCAC CCTGCAGCAG GGCTCGGCCT TCGCCGGGTT CGGCGAGGGT
GCCGGCCAGG GGAAGGGCAA GCTCGGCGAG GACACCAGCC CGTTCAAGTC GATCGAAGTG
CTCGTCGTCC CCGAGAACGT GACGAAGCTC GCCAAGGTGG AGCTGCGCCC CGGCGAGGCG
CCGCTGGTCG AGGAACGCGA CTTCGCGCTC AAGCGCAGCG AAACCCTCGA CGGCGCCCTC
AAGGCGACCG GGCAGGCCTC CGATCCGGCG ATCGCGGGCA TCGTCGCGGC GCTCGGCGGG
AAGGCCAAAG TCGCGGCCCT GTCGGAGGGC CAGCAGTTCC GCGTGCAGTT CGCACCCGGC
CCGAAACCCG GCGACGGGCG GCAGGTGACC CGCGTGGTGC TGTTCGGCGA GACCGGCGTC
CAGGCGATCG CGGCGATCAA CGATCACGGG GCGTTCGTGC CCGTGGCGCC GCCGGTGGAC
GAGACGCGGG GGCGCAACCG GGAGCAGGCC CAGGCCGAGA CGCCGGACGA CGATGAGGAG
GACGAGGGCA GCGGTCCGCG GCTCTACCAG AGCCTCTACG AGACCGGCGC GCGCCACGAC
GTGCCGCGCC CGACGATCGA GGATATCATC CGGATCTTCA GCTACGACAT CGACTTCCAG
CGCCGGATCT CTTCGGGCGA CGGGATCGAT CTGTTCTACA CCTACGACGA GGAAGCCGGC
CCCTCCGCCG CCGAGCGGCC GGAACTGCTC TACGCCGCCC TCAATCTCGG CGGCGAGTCG
CGCAAGGTCT ACCGCTTCCA GTCACCGGAT GACGGCTCGA TCGATTATCT CGACGAGCAG
GGCCGCTCGC TGAAGAAGTT CCTGATCCGC AAACCCATCG CCGACGGCAT CATGCGCTCG
GGCTTCGGCT ACCGGCGCCA CCCGATCCTC GGCTATGCCA AGCTCCATAC CGGCGTCGAT
TGGGCCAACC CGATCGGCAC GCCGATCGTG GCCGCCGGCA ACGGCACGGT GATCAAGGCC
GAGTGGGATT CGGGCTATGG CCGCCGCGTC GAGGTCCAGC ACATCAACGG CTACGTCACG
ACCTACAACC ACATGTCCCG CTTCGCCCGC GGGGTCAGCG CGGGCAGCCG CGTCCGGCAG
GGACAGGTGA TCGGCTATGT CGGCTCGACC GGACTCTCCA CCGGCGCGCA CCTGCACTAC
GAGGTGATCA TCAACGGGCA CTTCGTCGAT CCGATGAAGA TCCGCGTGCC GCGCGGTCGC
GAGCTCGATG GCCGGCTGCT CGCCGAGTTC AAGCGCCAGC GCGACCAGAC TGAGGCGACG
ATGCAGAAAT CGAAGACCGC CACGGCGATG GCGCAGCGCG ACGCGATGCG GTGA
|
|---|
| Protein sequence | MTRERLKIGG TAATAKPRPP TLPRGVEPPL NLLGADARQI DRRDVNLRWL CASALTGITG
ALLMGAAIHV SLQGDASLAA VSDRPNLGPR PQTQAPAIEE PGIASAHKGD RLVRNLMIAS
AKQSYRTPVT VRLGDREIIK VRPFVRISSN LSMSTGVFAS DIPRFDPMKF VSDEPQERAP
DPGAADAPGA EVTVVKRDLA EIAVDPGATA LSDEDVTAQI EEERRLAAEA GRRTALPLAP
QILLSRTLQQ GSAFAGFGEG AGQGKGKLGE DTSPFKSIEV LVVPENVTKL AKVELRPGEA
PLVEERDFAL KRSETLDGAL KATGQASDPA IAGIVAALGG KAKVAALSEG QQFRVQFAPG
PKPGDGRQVT RVVLFGETGV QAIAAINDHG AFVPVAPPVD ETRGRNREQA QAETPDDDEE
DEGSGPRLYQ SLYETGARHD VPRPTIEDII RIFSYDIDFQ RRISSGDGID LFYTYDEEAG
PSAAERPELL YAALNLGGES RKVYRFQSPD DGSIDYLDEQ GRSLKKFLIR KPIADGIMRS
GFGYRRHPIL GYAKLHTGVD WANPIGTPIV AAGNGTVIKA EWDSGYGRRV EVQHINGYVT
TYNHMSRFAR GVSAGSRVRQ GQVIGYVGST GLSTGAHLHY EVIINGHFVD PMKIRVPRGR
ELDGRLLAEF KRQRDQTEAT MQKSKTATAM AQRDAMR
|
|---|
| |