Gene Mext_0990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_0990 
Symbol 
ID5833063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp1067337 
End bp1068098 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content70% 
IMG OID641366772 
ProductHAD family hydrolase 
Protein accessionYP_001638466 
Protein GI163850423 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.480228 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAGG CGCTGATCTT CGACGTCGAC GGGACGCTCG CCGAGACCGA AGACCTCCAC 
CGCCAGGGCT TCAACCGGGC GTTTCGCGCC CTCGGTCTGC CCTGGCACTG GTCGCCGGAA
TTCTACGCCG AACTGCTCAA GGTGATGGGC GGCAAGGAGC GGCTCGTCCA CTACATCGAG
CGGTACCACC CCGAGGAGGC GCACGCGCTC AAGCGCCGGA TGCCAGAGAT CCACGATCTC
AAGACGCGCC ATTACGGCGC GTTGGCCGAG AGCGGCGGAC TTTCGCTCCG TCCCGGCGTG
CGGCGTCTCG TAGAAGAGGC GCGCGCGGAC AATGTGCGGC TGGCGGTGGC GACCACCACC
AGCCGGCCGA ACATCGACCT CCTGCTCCGG CTCAACTTCC CGGGCGACGC GCAGCCCTTC
GACGTGATCG CCGCCGGCGA CGAGGCGGCG CAGAAGAAGC CCGCCCCGGA TATCTTCGCG
CTTGCCGTCC ACCGTCTCGG CATCGATCCG TCCGAGGCGA TCGCTTTCGA GGATTCGGCG
GCCGGCATCC GCTCGGCGCT CGCCGCCGGC CTGCCGGTGC TCGCCACCCG CAGCCGCTAC
ACGCAGAGCC ACCGGCTCGA CGGGGCCTTC TCCGCCGTCT CCGATCTCGG CGAGCCGGAC
GCGCCGCATC AGCACCTTCA GGGCCATGCC TGGCCCGACG GCGTCGTCAC CCTCGACGCC
CTGCGCCGGT GGCATGCGGG GCACCTGCAC GGCGCGGCCT GA
 
Protein sequence
MLKALIFDVD GTLAETEDLH RQGFNRAFRA LGLPWHWSPE FYAELLKVMG GKERLVHYIE 
RYHPEEAHAL KRRMPEIHDL KTRHYGALAE SGGLSLRPGV RRLVEEARAD NVRLAVATTT
SRPNIDLLLR LNFPGDAQPF DVIAAGDEAA QKKPAPDIFA LAVHRLGIDP SEAIAFEDSA
AGIRSALAAG LPVLATRSRY TQSHRLDGAF SAVSDLGEPD APHQHLQGHA WPDGVVTLDA
LRRWHAGHLH GAA