Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_0990 |
Symbol | |
ID | 5833063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 1067337 |
End bp | 1068098 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641366772 |
Product | HAD family hydrolase |
Protein accession | YP_001638466 |
Protein GI | 163850423 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.480228 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGAAGG CGCTGATCTT CGACGTCGAC GGGACGCTCG CCGAGACCGA AGACCTCCAC CGCCAGGGCT TCAACCGGGC GTTTCGCGCC CTCGGTCTGC CCTGGCACTG GTCGCCGGAA TTCTACGCCG AACTGCTCAA GGTGATGGGC GGCAAGGAGC GGCTCGTCCA CTACATCGAG CGGTACCACC CCGAGGAGGC GCACGCGCTC AAGCGCCGGA TGCCAGAGAT CCACGATCTC AAGACGCGCC ATTACGGCGC GTTGGCCGAG AGCGGCGGAC TTTCGCTCCG TCCCGGCGTG CGGCGTCTCG TAGAAGAGGC GCGCGCGGAC AATGTGCGGC TGGCGGTGGC GACCACCACC AGCCGGCCGA ACATCGACCT CCTGCTCCGG CTCAACTTCC CGGGCGACGC GCAGCCCTTC GACGTGATCG CCGCCGGCGA CGAGGCGGCG CAGAAGAAGC CCGCCCCGGA TATCTTCGCG CTTGCCGTCC ACCGTCTCGG CATCGATCCG TCCGAGGCGA TCGCTTTCGA GGATTCGGCG GCCGGCATCC GCTCGGCGCT CGCCGCCGGC CTGCCGGTGC TCGCCACCCG CAGCCGCTAC ACGCAGAGCC ACCGGCTCGA CGGGGCCTTC TCCGCCGTCT CCGATCTCGG CGAGCCGGAC GCGCCGCATC AGCACCTTCA GGGCCATGCC TGGCCCGACG GCGTCGTCAC CCTCGACGCC CTGCGCCGGT GGCATGCGGG GCACCTGCAC GGCGCGGCCT GA
|
Protein sequence | MLKALIFDVD GTLAETEDLH RQGFNRAFRA LGLPWHWSPE FYAELLKVMG GKERLVHYIE RYHPEEAHAL KRRMPEIHDL KTRHYGALAE SGGLSLRPGV RRLVEEARAD NVRLAVATTT SRPNIDLLLR LNFPGDAQPF DVIAAGDEAA QKKPAPDIFA LAVHRLGIDP SEAIAFEDSA AGIRSALAAG LPVLATRSRY TQSHRLDGAF SAVSDLGEPD APHQHLQGHA WPDGVVTLDA LRRWHAGHLH GAA
|
| |