Gene Mext_0653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_0653 
SymbolrpsP 
ID5834193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp712389 
End bp712751 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content71% 
IMG OID641366436 
Product30S ribosomal protein S16 
Protein accessionYP_001638138 
Protein GI163850095 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0228] Ribosomal protein S16 
TIGRFAM ID[TIGR00002] ribosomal protein S16 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.141648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.112542 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTCA AGATCCGTCT CACCCGTGGC GGCGCCAAGA AGCGCCCGTA CTACCGCATC 
GTCATCGCTG ACGCCCGCGC CCCGCGCGAC GGCCGCTTCA TCGACAAGGT CGGCGCCTAC
GACCCGATGA AGGCCAAGGA CGATCCGGCC CGGATCGTGC TCGACAACGA GAAGATCCAG
TCCTGGCTCG CCAAGGGCGC GCAGCCGACC GACCGCGTCC TGCGCTTCCT CGACGCCGCC
GGCCTCGCCA AGCGCCCGAC CCGCAACAAC CCGCAGAAGG CCGAGCCGGG CGAGAAGGCC
AAGGAGCGCG CCGCCAAGCG CGCCGAGAAG GCTGCCGCCC CGGCCGAAGA CGCCGCGGCG
TAA
 
Protein sequence
MSLKIRLTRG GAKKRPYYRI VIADARAPRD GRFIDKVGAY DPMKAKDDPA RIVLDNEKIQ 
SWLAKGAQPT DRVLRFLDAA GLAKRPTRNN PQKAEPGEKA KERAAKRAEK AAAPAEDAAA