Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_0605 |
Symbol | |
ID | 5834999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 664107 |
End bp | 665429 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641366388 |
Product | glycine oxidase ThiO |
Protein accession | YP_001638090 |
Protein GI | 163850047 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | [TIGR02352] glycine oxidase ThiO |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.14254 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.0463062 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGCGCT CGTACGAGCG GACCCGCTTC TATCGAAGCA CATGGTGCCA GTTCCTGCGG GCAGACCCGT GGAAGGCACG TTTTTCGATG TCAGACCTGC TGACCTCCCC GATCGGCCAG CGCCGCAGCC TCGCGATACG GCCGCGCGCG GCGGAGTTGC CGCAGCGTGC CGACGTCGCC GTGGTCGGCG CGGGGCTGAT CGGCCTGTCG ATCGCGTGGC GGCTGGCGCA GGCCGGCCGC TCGGTGGCCG TGGTGGAGCG CGGTAGCGTC GGCAGCGGTG CGAGCCTCGC CGCGACCGGC ATGCTAGCGC CGGCCGCCGA GCACGAGCCG GGCTCCGATC TGCTGTTGCC GCTTGCGCTC GAATCCCTGC GCCGCTGGCC GGCTTTCCGC GATGCGCTCC AGGCGGCCTC GGGCCGCGAG ATCGATTACC GCGAGGACGG CACCCTCGTG ATCGCCATCG GCCGCGACGA GGTGGAGCGC CTGCGCTTCC GTCACGACCT GCAGCGCCGC TCGGGCGTCG CCGCCGAATG GCTGTCCGGC CCGGAGGTGC GCGCGCGTGA GCCGCTGCTG CGCCCTAACG TCACCGCCGG CATCCTTTGC CCCCTCGACG CGCAGGTCGA TCCGCGGCTC GTGATGGAAG CGCTGCTGTG CGCCTGCGAG GCGGCCGGCG TCGTCATCAG CGAGGGCGTC GCGGTCGACG GCCTGGAGCG CCGGGGCGGG CGCGTCACCG GCCTGCACGC CGCTGGCCGC ACGCTCACCG CCGACACGGT GATCCTGGCC GCCGGCGCCT GGAGCGGCGA TGCGAGCCTG CTTCCCAGCG ACTTGGACGT GCCCGACCTG TCCGTGCCGG TCCGGCCGCT CAAGGGGCAG TCGCTGGCCC TGCGCACGAC CAAGCGCACA GGCACCCTCT CCCGCATGGT GTGGACCGAC GCGGTGCATA TGGCGCCGAA GGGCGACGGG CACCTCATCG TCGGCGCCAC GGTGGAGGAT TGCGGCTTCA CCAGCGGTGT CACCGCGGGC GGCATGTTCG CCTTGCTGGA GGGCGCGCGG CGGGTTCTGC CCGGTATCGA GGAAATGGAG ATCGACGCGG TCTGGAGCGG CTTCCGCCCG ACCTCGGACG ACGACGCACC GATCATCGAG GAGGCCGCAC CCGGCCTCGT CCTCGCCACC GGCCATCACC GCAACGGTTA CCTGCTCGCC CCCGCCACCG CCGACGCCGT GGCGACGCTT CTTACCGAGG GCGCGCTGCC GGACTTCGCC CGCGGCTTCG GACGGGCGCG CTTCTCGTCA TCGCATCAAA CCGGAGGGAG GGCCGTGGCA TGA
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Protein sequence | MGRSYERTRF YRSTWCQFLR ADPWKARFSM SDLLTSPIGQ RRSLAIRPRA AELPQRADVA VVGAGLIGLS IAWRLAQAGR SVAVVERGSV GSGASLAATG MLAPAAEHEP GSDLLLPLAL ESLRRWPAFR DALQAASGRE IDYREDGTLV IAIGRDEVER LRFRHDLQRR SGVAAEWLSG PEVRAREPLL RPNVTAGILC PLDAQVDPRL VMEALLCACE AAGVVISEGV AVDGLERRGG RVTGLHAAGR TLTADTVILA AGAWSGDASL LPSDLDVPDL SVPVRPLKGQ SLALRTTKRT GTLSRMVWTD AVHMAPKGDG HLIVGATVED CGFTSGVTAG GMFALLEGAR RVLPGIEEME IDAVWSGFRP TSDDDAPIIE EAAPGLVLAT GHHRNGYLLA PATADAVATL LTEGALPDFA RGFGRARFSS SHQTGGRAVA
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