Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_0594 |
Symbol | |
ID | 5835252 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 655679 |
End bp | 656923 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641366377 |
Product | polyhydroxyalkanoate depolymerase, intracellular |
Protein accession | YP_001638079 |
Protein GI | 163850036 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4553] Poly-beta-hydroxyalkanoate depolymerase |
TIGRFAM ID | [TIGR01849] polyhydroxyalkanoate depolymerase, intracellular |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.470124 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.0258179 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCTGG CATATATCTG GTACGAGACG GCCCGCGCGA TGTTGACGCC GGCCCGGCTC GCGGCGGATG CCGCTCGGCA CAGCCTGGCG AATCCCGGCA ATCCGTTCGC CTACGGTCCC TATGCCCGCT CGGCGGCCGC CGCGCTGGAA ATGTTCGAGC GTGTGACCCG CCGCTACGGC AAGCCGGCCT TCGGCCTGCC GACGACCGTG ATTGACGGCC AGGTCGTCCC GGTCTCCGAA CGCGTCGTCT GGGAACGGCC CTTCGGCCGG GTGATCGCCT TCGATCGGGC GCTGCCCGCC GGGCATTCGG AGCCGCAGCC CAAGCTCCTG ATCGTGGCGC CCATGTCGGG CCATTACGCG ACGCTCCTGC GCGGCACCGT CGAGGCGATG CTGCCCAACC ACCGGGTCTT CATCACGGAT TGGTCCGACG CGCGCATGGT CCCGTTGCTG GACGGGCGCT TCGACCTCGG CACGTATATC GATTACCTGC AGGCGATGTT CCGTGACCTC GGGCCGGACC TGCACGTGAT GGCCGTCTGC CAGCCCGCTG TGCCGGTCTT CGCCGCGGTC GCGCTGATGG AGGCGGCGGA TTCGGCCCAC GTGCCGGTCT CGATGACCCT GATGGGCGGG CCGATCGACA CCCGCCGCTC GCCGACCGCC GTGAACTGCC TCGCGCAGGA GCGCGGCATG GCTTGGTTCG AGAAGAACTG CATCACGGTG GTGCCGCCGC TCTATCCGGG GGCGATGCGC CGGGTCTATC CCGGCTTCCT GCAGCTTTCG GGCTTCATGG CGATGAACCT CGATCGCCAC GTCACCGCCC ATACCGACAT GTTCCATCAC CTCGTGACCG GCGACGGCGA TTCGGCGGAG AAGCACCGCG ACTTCTACGA CGAGTATCTC GCGGTGATGG ACCTGACGGC GGAATTCTAC CTCCAGACCG TGCAGACCGT CTTCGTCGAT CACGCCCTGC CGCGCGGGCG GATGCGCCAT GACGGACGGT TGGTCGATCT CTCGGCGATC CGCCGTTGCG CCATCCTCGC CGTCGAGGGC GAGAACGACG ACATTTCCGG CGTCGGCCAG ACCAAGGCCG CCCTCGATCT CACCCCGAAC CTGCCCGATG CCCGCAAGGC CTACCACATG CAGGAGAAGG TGGGGCATTA CGGCGTGTTC AACGGCTCGC GCTTCCGGTC CGTCATCGCC CCGCGCATCG CCCGCTTCGT GCGCGAGATG GAGGGAAGCG CCTGA
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Protein sequence | MDLAYIWYET ARAMLTPARL AADAARHSLA NPGNPFAYGP YARSAAAALE MFERVTRRYG KPAFGLPTTV IDGQVVPVSE RVVWERPFGR VIAFDRALPA GHSEPQPKLL IVAPMSGHYA TLLRGTVEAM LPNHRVFITD WSDARMVPLL DGRFDLGTYI DYLQAMFRDL GPDLHVMAVC QPAVPVFAAV ALMEAADSAH VPVSMTLMGG PIDTRRSPTA VNCLAQERGM AWFEKNCITV VPPLYPGAMR RVYPGFLQLS GFMAMNLDRH VTAHTDMFHH LVTGDGDSAE KHRDFYDEYL AVMDLTAEFY LQTVQTVFVD HALPRGRMRH DGRLVDLSAI RRCAILAVEG ENDDISGVGQ TKAALDLTPN LPDARKAYHM QEKVGHYGVF NGSRFRSVIA PRIARFVREM EGSA
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