Gene Mext_0557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_0557 
Symbol 
ID5835798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp606696 
End bp607436 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content70% 
IMG OID641366334 
Product3-oxoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_001638043 
Protein GI163850000 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGACC TCACCGGCCG CAAGGCCCTC GTCACCGGCG CGACCGGCGG ACTCGGCGGG 
GCGATCGCCC GGGCGCTGCA CGCGCAGGGC GCCCATGTCG CGCTGTCCGG CACCCGCCGC
GCGGTGCTCG ACGAACTGGC GGCGGAACTC GGCGGCGAGC GCGTCGCGGT GGTCGAGGCC
AACCTCGCCG ACAAGGAGGC GGTGGAAGCG CTGCTTCCGG CCGCCGAATC AGCGCTCGGC
GGTCTCGACA TCCTGATCAA CAACGCGGGC ATCACCCGCG ACAACCTCTT CATGCGGATG
AAGGACGAGG AATGGGAGGC GGTGCTCAAC GTCAACCTGA CCGCCGCCTT CCGCCTGTCG
CGGGCCGCGC TCAGAGGGAT GATGAAGCGC CGCCACGGCC GCATCATCGG CATCGGCTCG
GTCGTCGGCG CCACCGGCAA TCCGGGCCAG GGCAACTACG CGGCGGCCAA GGCCGGGCTG
GTGGGCATGA CCAAGGCTCT GGCGGCCGAG GTTGCGACGC GCGGGATCAC GGTGAACTGC
ATCGCGCCCG GCTTCATCAG TTCGGCGATG ACCGACGCGC TCAACGAGAA GCAGCGCGAG
ACGATTCTTA CCCGCGTACC CGCCGGCCGA CTCGGCACGG GCGCCGAAAT CGGGGCCGCC
GCAGTCTATC TCGCCTCGGA AGAAGCGGGT TACGTGACGG GCCAAACGCT GCACGTCAAT
GGCGGCATGG CGATGTACTG A
 
Protein sequence
MFDLTGRKAL VTGATGGLGG AIARALHAQG AHVALSGTRR AVLDELAAEL GGERVAVVEA 
NLADKEAVEA LLPAAESALG GLDILINNAG ITRDNLFMRM KDEEWEAVLN VNLTAAFRLS
RAALRGMMKR RHGRIIGIGS VVGATGNPGQ GNYAAAKAGL VGMTKALAAE VATRGITVNC
IAPGFISSAM TDALNEKQRE TILTRVPAGR LGTGAEIGAA AVYLASEEAG YVTGQTLHVN
GGMAMY