| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_0412 |
|---|
| Symbol | |
|---|
| ID | 5834824 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 455003 |
|---|
| End bp | 455920 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641366196 |
|---|
| Product | extensin family protein |
|---|
| Protein accession | YP_001637905 |
|---|
| Protein GI | 163849862 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3921] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.531643 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCTT CCACCCTCGC TTCCCTTCTC GCGTGCCTCC TCGCCGCCGG GCTCGCCCTT
CCGCCGGACC CGGCATGGTC CGATCCCGCC AAGCCGCCGC CAGCGACGGT GCCGCTACCG
CCGCCCCAGC CGCCGGCGCG CCCGGACGAC CTCGTGCCGC CCGCTCCGCA GGTGACGCCG
CTGCCGCCGG AGCGTCCGCC GGAGCTTGCC ACCGGCCCGG ACAAGGGCGC CGTGGCCAAG
CCGGACGAGC CGCCCAAGGA GACGAAGACC ACGAACGACA CGAAGGACGC GCCCGCCGCC
CTGCCGGAGG CGCCGCTGCC GCCGGCTCGG CCGCCGGAGC TGTCGGGCGA GTCGGCGCTC
GCCCTCAAGG TCTCGGCGCC CGACGACACC GCCTGCCTGC GCCGGCTGGA GCGGCTCGGC
GCGCGCTTCG AGGCGGCGTC GCCGCTCGGC AACGGCCAAT GCAGCGCGCC GCATCCTCTC
ACCGTCACCG CGCTTGCCGA CGGCGTCACG CTGGAGCCGG CGGCCACCCT CAACTGCCGG
GCCGCGGAGG CGCTGGCGCG CTGGACGACG GAGGTTCAGG TCGCGGCGCA AAAGGAGTTC
GGCGAGAGCC TGAAGAGCCT TGCGCTCGGC GGCACCTATG TCTGCCGCGG GCAGAACCAC
GACACCGACG CCAAACTCAG CGAGCACAGC TTCGCCAACG CCATCGACGT GATGGTCTAC
GGTTTCACCA AGCGCGCGAG CCTCAAGGTG ACGGCGGCGC CGGACGGCAC GCCGGAGGCG
GCCTTTCTGG CCTCGGCGCG CATGGGCGCC TGCACCTTCT TCCGCACGGT GCTGGGGCCG
GGCAGCGACG CCGCGCACGG CAACCACCTG CATCTCGACC TGCGCGAGCG CAATGCCGGG
CACCGCCTCT GCCAGTAG
|
|---|
| Protein sequence | MKPSTLASLL ACLLAAGLAL PPDPAWSDPA KPPPATVPLP PPQPPARPDD LVPPAPQVTP
LPPERPPELA TGPDKGAVAK PDEPPKETKT TNDTKDAPAA LPEAPLPPAR PPELSGESAL
ALKVSAPDDT ACLRRLERLG ARFEAASPLG NGQCSAPHPL TVTALADGVT LEPAATLNCR
AAEALARWTT EVQVAAQKEF GESLKSLALG GTYVCRGQNH DTDAKLSEHS FANAIDVMVY
GFTKRASLKV TAAPDGTPEA AFLASARMGA CTFFRTVLGP GSDAAHGNHL HLDLRERNAG
HRLCQ
|
|---|
| |