Gene Mext_0379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_0379 
Symbol 
ID5835610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp421076 
End bp421855 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content65% 
IMG OID641366163 
ProductABC-2 type transporter 
Protein accessionYP_001637872 
Protein GI163849829 
COG category[S] Function unknown 
COG ID[COG1511] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.8814 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGGCG TATCCATGCT GAACGTCCCG GCGGTCCTCG CCATCTACCG TTTCGAGATG 
GCTCGGTTCT GGCGCACCGC CCTGCAGAGC ATCGTCGCGC CGGTGATCTC CACCTCGCTC
TATTTCGTGG TGTTCGGCGC CGCCATCGGC TCGCGGATGC AGACGGTCGA TGGGGTTCCC
TACGGCGCGT TCATCGTGCC GGGGCTGATC ATGCTCTCGC TGCTGACGCA GAGCGTCTCG
AACGCGGCCT TCGGCATCTA TTTCCCGCGC TTTGCCGGCA CGATCTACGA GCTGCTCTCG
GCGCCGATCT CGCCGTTCGA GGTGGTGCTC GGCTATGTCG GCGCGGCGGC GACGAAGTCG
ATCATCATCG GCCTCATCAT CCTCGCCACG GCCTCGCTGT TCGTGCCGCT GCACATCGAG
CATCCGTTCT GGATGGTGTT CTTCCTGCTG CTCACGGCGC TGACCTTCAG CCTGTTCGGC
TTCGTGATCG GCCTGTGGGC CGACGGGTTC GAGAAGCTGC AACTGGTGCC GCTGCTCATC
GTCACGCCGC TGACATTCCT CGGCGGCAGC TTCTACTCCA TCGACATGCT GCCCCCGTTC
TGGCGCGCGG TGACCCTGTT CAATCCGGTC GTCTACCTCG TCAGCGGCTT CCGCTGGGCC
TTCTTCGGCA AGGGTGACGT GGCGGTCGGG GTCAGCATCG CCGCGACGCT GGCGTTCCTC
GCCCTGTGCC TCGGGCTCGT GACCTACATC TTCCGCACGG GGTACCGGCT GAAGAGCTGA
 
Protein sequence
MMGVSMLNVP AVLAIYRFEM ARFWRTALQS IVAPVISTSL YFVVFGAAIG SRMQTVDGVP 
YGAFIVPGLI MLSLLTQSVS NAAFGIYFPR FAGTIYELLS APISPFEVVL GYVGAAATKS
IIIGLIILAT ASLFVPLHIE HPFWMVFFLL LTALTFSLFG FVIGLWADGF EKLQLVPLLI
VTPLTFLGGS FYSIDMLPPF WRAVTLFNPV VYLVSGFRWA FFGKGDVAVG VSIAATLAFL
ALCLGLVTYI FRTGYRLKS