Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_0379 |
Symbol | |
ID | 5835610 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 421076 |
End bp | 421855 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641366163 |
Product | ABC-2 type transporter |
Protein accession | YP_001637872 |
Protein GI | 163849829 |
COG category | [S] Function unknown |
COG ID | [COG1511] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.8814 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGGCG TATCCATGCT GAACGTCCCG GCGGTCCTCG CCATCTACCG TTTCGAGATG GCTCGGTTCT GGCGCACCGC CCTGCAGAGC ATCGTCGCGC CGGTGATCTC CACCTCGCTC TATTTCGTGG TGTTCGGCGC CGCCATCGGC TCGCGGATGC AGACGGTCGA TGGGGTTCCC TACGGCGCGT TCATCGTGCC GGGGCTGATC ATGCTCTCGC TGCTGACGCA GAGCGTCTCG AACGCGGCCT TCGGCATCTA TTTCCCGCGC TTTGCCGGCA CGATCTACGA GCTGCTCTCG GCGCCGATCT CGCCGTTCGA GGTGGTGCTC GGCTATGTCG GCGCGGCGGC GACGAAGTCG ATCATCATCG GCCTCATCAT CCTCGCCACG GCCTCGCTGT TCGTGCCGCT GCACATCGAG CATCCGTTCT GGATGGTGTT CTTCCTGCTG CTCACGGCGC TGACCTTCAG CCTGTTCGGC TTCGTGATCG GCCTGTGGGC CGACGGGTTC GAGAAGCTGC AACTGGTGCC GCTGCTCATC GTCACGCCGC TGACATTCCT CGGCGGCAGC TTCTACTCCA TCGACATGCT GCCCCCGTTC TGGCGCGCGG TGACCCTGTT CAATCCGGTC GTCTACCTCG TCAGCGGCTT CCGCTGGGCC TTCTTCGGCA AGGGTGACGT GGCGGTCGGG GTCAGCATCG CCGCGACGCT GGCGTTCCTC GCCCTGTGCC TCGGGCTCGT GACCTACATC TTCCGCACGG GGTACCGGCT GAAGAGCTGA
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Protein sequence | MMGVSMLNVP AVLAIYRFEM ARFWRTALQS IVAPVISTSL YFVVFGAAIG SRMQTVDGVP YGAFIVPGLI MLSLLTQSVS NAAFGIYFPR FAGTIYELLS APISPFEVVL GYVGAAATKS IIIGLIILAT ASLFVPLHIE HPFWMVFFLL LTALTFSLFG FVIGLWADGF EKLQLVPLLI VTPLTFLGGS FYSIDMLPPF WRAVTLFNPV VYLVSGFRWA FFGKGDVAVG VSIAATLAFL ALCLGLVTYI FRTGYRLKS
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