| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_0341 |
|---|
| Symbol | |
|---|
| ID | 5832529 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 385520 |
|---|
| End bp | 386437 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641366126 |
|---|
| Product | cytochrome c class I |
|---|
| Protein accession | YP_001637836 |
|---|
| Protein GI | 163849793 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3474] Cytochrome c2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTCCT TCGAGCTGAA CAAGGTTGCG GGCGCGGTCC TGGGTGCCCT CCTGTTCGCG
GTTGGGTCGG GCTTCGTGGC GGAGCTGATC TATCACCCGA AGCCCGTCGG AAGCGCCGGC
TATCCTCTGC CGGACCCCGA GCCGAAGAGC GGCGGCGCCG CGGCGGAAGC GCCGAAGGCC
GAGCCCATCG CCGTGCGGCT CGCCAGCGCC GATGCTGAGA AGGGCAAGGG CGGCACCAAG
GCCTGCCAGG CCTGCCACAG CTTCGAGAAG GGCGGCCCCA ACAAGGTCGG CCCCGATCTC
TGGGAGATCG TGGAGCGCGA GAAGGCGCAT GCCGCCGGCT TCGATTACTC CGCCGCGCTC
AAGGAGAAGG GCGGCACCTG GACCTACGAG GATCTCGACC ACTTCCTCGA AAGCCCGAAG
GGCTACGTGA AGGGCACCAA GATGGCGTTT GCCGGCATCG GCTCGCCGAC GGACCGCGCC
AACGTCATCG CCTATCTGCG CACGCTCGCC GACAGCCCGA AGCCGCTGCC GGCCGCCGAG
AAGAAGGCTG AAACGGCGCC GGCAGGCGAC AAGAAGGCCG AGACCGAGAA GCCCGCCGAG
GGCAAGCCCG ACGCCAAGAA GGCCGTCGAG GACAAGAAGC CCGCCGGGAC CAAGCCGGTG
GAGAGCGCGA CGGGCGACAA GAGCAAGACG CCCGAGACCA ACGCGCCGCA GGGCAACACC
CAATCGGGTG ACGGCAAGGA CACCGCCCGC CCGGTCCCGG CGCCGCAGGT CCAGCCCCAG
CGTAACGAGG TCGCACCGAC GCAGGCGCCC GAGGCCAAGC CCTCGGGGGA CATCCCGACC
AAGGCGGATC CGGGCTCCGA GTCGACGCCG GCCACCGAGC CGCCGGCCAA GCCCGACCCT
GACGCGCCCA AGCCGTAA
|
|---|
| Protein sequence | MDSFELNKVA GAVLGALLFA VGSGFVAELI YHPKPVGSAG YPLPDPEPKS GGAAAEAPKA
EPIAVRLASA DAEKGKGGTK ACQACHSFEK GGPNKVGPDL WEIVEREKAH AAGFDYSAAL
KEKGGTWTYE DLDHFLESPK GYVKGTKMAF AGIGSPTDRA NVIAYLRTLA DSPKPLPAAE
KKAETAPAGD KKAETEKPAE GKPDAKKAVE DKKPAGTKPV ESATGDKSKT PETNAPQGNT
QSGDGKDTAR PVPAPQVQPQ RNEVAPTQAP EAKPSGDIPT KADPGSESTP ATEPPAKPDP
DAPKP
|
|---|
| |