Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_0278 |
Symbol | |
ID | 5833049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 313007 |
End bp | 314413 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641366062 |
Product | RluA family pseudouridine synthase |
Protein accession | YP_001637773 |
Protein GI | 163849730 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGGAC GTCCACCACA TCGCGGGTCC GGCGCAAAAC GCGGACCCAG CGGGTTCGCG CCGCGTGCCG GCACGGGGCC GCGCACCTCC GCCAAAGACG CAGCGCAGCG CGCCGCCCGC AACCGCGGCG AGGACGCCGC CGAGCGCTCG CCCTGGGATG ACGGCGCGGC CAGCGAGAGC GCACCGCGCC CGAATCGCGT GCCCGAAGCC GCCGCATCGA AGCCGGACGC GCCGCGCGCT CGCGCCAAAT CGCCTTCTGA CAAGCCGCAC GCTGCCAAGC CGTCATTCGC CAAGCCCTCC TTTGCCAAGT CCTCCTTGGC CAAGCCTGAC CCGGCCAAGG CACCGCCCGC GGAGGCTCCG GCCGGCCCGA CGCGCCGCGA ACAGCGGGCT GCGGCCTCGG CGACGCTGGC AAGTGGCGTG CAGACGCTGA CCGTCGACCC CGACGAGGCC GGGATGCGCA TCGACCGCTT TCTGGGCGCG CGCTTTCCGC AGCTTCCCTT CACTCGCGTG CAGAGCATCG TCCGCAAGGG CGAGCTGCGG GTCGATGGCA AGCGCGCCAA GCCGAACGAC CGGCTGGAGC CGGGTTCGAG CGTGCGGGTG CCGCCGCTCA AGCTCGACCA GCCGACCGAG AGGCCGCGCA GCGCCGCCAA GATCGATGGG GACGCCGAGT TCCTGCGTTC GCTGATCCTC TACGAGGATG CGGACATGAT GATCCTCAAC AAGCCGTTCG GCCTCGCGGT GCAGGGCGGC TCGGGCACGG TGCGCCACGT CGACGGCCTG TTGGAGGCGT TGACCGGGCC GGATGGACAG CGCCCGCGCC TCGTCCACCG CCTCGACAAG GACACGGCTG GCTGCCTGAT CGTTGCCAAG ACGCGTCTGG CCGCGTCGAC GCTGGCCAAG AGCTTCCGCT CGCGCGCCGC GCGCAAGATC TACTGGGCGC TGGTGGCCGG CGTGCCCCGC ACCCGCCAGG GCCGGGTCTC GACCTACCTC GTCAAGGACG AGCCGACCGA CGCCGATGCG CGCATGCGCG TCGCCAAACA CGGCGACGAC GGCGCCAGCC ACGCGCTCAC CTACTACGCC ACGGTCGATC AGGCGGCGCA GAAGCTGGCC TGGCTCTCGC TGAAACCCGT CACCGGGCGG ACGCACCAGT TGCGGGCCCA CGCTGCGCAT ATCGGCCACC CGATCGTCGG CGACCCGAAA TATTTCGACG TGGAGAACTG GGAGCTGCCC GGCGGCATCC AGAATCGCCT GCACCTGCTC GCCCGCCGCA TCGTGATCCC GCATCCGCGC ACCGGCCAGC CGGTCGATGT CAGCGCCCCG CTGCCGCCGC ACATGGCGCA GAGCTGGAAC CTGCTCGGTT TCGATGCCGC CCGCTACGAC CCGATCGTCG AAGCGCCGGA AGCCTGA
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Protein sequence | MKGRPPHRGS GAKRGPSGFA PRAGTGPRTS AKDAAQRAAR NRGEDAAERS PWDDGAASES APRPNRVPEA AASKPDAPRA RAKSPSDKPH AAKPSFAKPS FAKSSLAKPD PAKAPPAEAP AGPTRREQRA AASATLASGV QTLTVDPDEA GMRIDRFLGA RFPQLPFTRV QSIVRKGELR VDGKRAKPND RLEPGSSVRV PPLKLDQPTE RPRSAAKIDG DAEFLRSLIL YEDADMMILN KPFGLAVQGG SGTVRHVDGL LEALTGPDGQ RPRLVHRLDK DTAGCLIVAK TRLAASTLAK SFRSRAARKI YWALVAGVPR TRQGRVSTYL VKDEPTDADA RMRVAKHGDD GASHALTYYA TVDQAAQKLA WLSLKPVTGR THQLRAHAAH IGHPIVGDPK YFDVENWELP GGIQNRLHLL ARRIVIPHPR TGQPVDVSAP LPPHMAQSWN LLGFDAARYD PIVEAPEA
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