| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_0274 |
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| Symbol | |
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| ID | 5833586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 302514 |
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| End bp | 307778 |
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| Gene Length | 5265 bp |
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| Protein Length | 1754 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641366057 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001637769 |
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| Protein GI | 163849726 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATGCGT TCGGCCTCGA CCAGACCCTG ATCCGGGACT ACGACGCGTT CGCGCGATCT
TTCAACAAGA TCGCTGCCGA TGACATCCGG ACCGAGGTGG ATCGTCTATA CGACAGCAAG
GCGTTTTGGC CGGATCCGCT GATCACGATC AACCCGCACT TCGCTCGCGG GGAGACGCTG
GACGACCTCG TGAAGGACGA TGTCCTCCAC CCGCTTACGA CGCACGTCTT CCGAGAGCGC
GGCCGGGTCC TCAAGCCGCA CCTTCATCAG GTCGAGGCGC TGACGAAGGC CAAGGCCGGC
AAGAGCTTCG TCGTCACGAC CGGTACCGGA TCGGGCAAGT CGCTCTGCTA CTTCCTGCCG
ATCATCGACG AGGCGATCCG GGAGCGTCAA AAGCCCGACT TCAAGCCGCG TACTCGCGCC
ATCGTCGTCT ATCCGATGAA CGCGCTGGCG AACTCGCAGT TCGAGGGCCT AACCGAGTTT
CTGAACCAAT GCGGCATTCC GGAAGCACAA CGCCCGCGCG TGCGCATCTA CACAGGCCAG
GAGAGCCGCG AGAAGCGCGA GGAGGTCCGG GACAACCCGC CGGACATCCT GCTCACCAAC
TTCATGATGC TCGAACTGCT GCTGACGCGG CAGAGTGAGC TTGACGCCCA GGTGATAGGC
AACGCCCGCG GCCTGCGCTG GATCGTGCTC GACGAGTTAC ACACTTATCG CGGGCGTCAG
GGTGCTGATG TCGCCGTCCT AGTGCGCCGA CTGCGCGACC AGCTGTGCCG CGGCCACAGC
GAGCCCGTCT GCATTGGCAC GTCTGCAACC ATGGCGACGC CGGACCAGGG TAATCCGATC
AAAGCGGTGG CTAAGGTCGC CAGCGACTTG TTCGGCGTCT CGGTCGAGAC CGACTGCGTC
ATAGAGGAGA CCCTTCAGCG CGCCACCGAC GAGGATCTGA CCGTCGCCAG CGTACAGGGT
CAGCTCGCCG CCTGCATCCA GAACCCGGTG CCAACAAACG CGACCGATGC CGAACTGAAG
ATTCATTCGC TTGCCGTCTG GATCGAGCTG CGGATCGGGT TGGAGTACAA GCCTCAACTA
AAGCGGCGTC CACCGATGAC TTTAGTGGAT GCAGCGAAGG CCCTCTCCGA TGAGACCGGG
TGCGACGCGG AGCTGTGCGA GCAGCGTCTA CGCGAGATGC TCGGTCTCTT GGCCCGTCCC
GGCGCTGAAC GGGGTGGTAC CGGGTCCCGT GCGTTCCTGG CGTTCAAGCT GCATCGGTTC
ATCTCGGGCG CTGGCCTCGT CTACACGACC CTACGAACGG CCGGCCCCAC CGGCATCCGT
CGCGTCACGC TGAAGGGTCA GACCCACCAT CCAGACGACA AGACCGCGCT GCTGTTCTCG
ACCCACTTCT GTCGCGATTG CGGCCACGAA TATCACCCGG TCATGCGCCT CGACGACGAG
GACGGCGACC GCTTCGTAGC GCGCTCGATC GACGATCCAA TCAGCGAGCG GGAGACGGAT
AGCGGCACCG CCGGCTACCT CGTGCCCGAG CCCGCGACGA TCAACGAGTT TTTCCAGGGC
GCGCTCGACG AGTACCCCGA CGAGTGGGTC GAGCACACAC CGCGCGGATC GCGCCTGAAA
TCCACTCGCC GGAAGCAGCA AGTTGCCGCC GCCGTCGTCC TGCCGAACGG GCGCGTCGAC
GCCGCCGGCC GCCAGGCCTG GTTCATCCCC GGCCGGTGGC GGTTCTGCCT GAACTGCAAG
CTGGAAGCCC AGCCCGGAAC CCGCGAGCAG AACAAGCTTG CTGGCCTGAC CGCCGAGGGT
CGCTCGTCCG CGACAACGCT CATCGTGAGC AGCCTCCTGC GCTTCATGCA TCGTCCCGAG
GCGAAGATCG CCGACGACAA GCGCAAGGTG CTGGGGTTCT CCGACAACCG TCAGGACGCG
GCGCTTCAGG CGGGGCACTT TAACGACTTC ATCTTCACGA CGCTGCTGCG GGCTGCCGTC
CTCTCGGCCG TGCAAGCCGC TGGCCCTGAC GGCCTCGCCG AGGCCGAGTA CGGCATGGCC
GTGCAGAAGG CGCTCGGTTT CGAGGACAAC AACGACGACC GCCGCCGCCA CTGGATGCGC
TCGCCCGATG CCGTCGGCCC GTCCCGTGCG CGGGCGATCA CCGATCTAAC GCGCGTTCTC
AGCCACCGTG TGTGGAGCGA CCAGCGCCGT GGCTGGCGAT ACACCAACCT GAACCTCGAG
AACCTCCAGC TCATCCGGGC GCACTACCCG GGCCTCGAGA GTTGCGCCGA CGAAAGCCTC
TTCAAGGATG CCCCGCTGCT GCGCAGCCTC AAGCCCGATG CGCGGCGACG GGTCTTTCAC
GCTCTGTTTG AGGTCATGCG CGGGGAACTC GCAGTCGAGA GCGACTTCTT GAAGAAGGCG
ACGACCGAGA GCTTGGGTCG GTCCTCCCGC GACAACCTGC GCACGCCTTG GGCGATCTCG
GAGCAGGAGG CGGTCTCGAA CGCCGGGCTG CTGATCGTCC CGGAGGGAGC CGGAGGCAAG
GCTCAGCCGA ATGGTCGCGG GCCCGACAGC CGCCTGATCA CGGCCGGTCC CAACAGCCGT
GTCGGCAAGA AGCTGCGGCA CGGTCACCTC TGGGGTGGTC GACGCCTCAC AGTCCACGAG
TACAACGAAC TCCTGGAGAG CGTCGTCCGG ATCGCCAAGG TTCAGAACTG GGTCCGGGAG
GTCTCGGAAT ACGGGATCAC CGGCCTGCGG TTGTTGCCCT CCGCCATTCG GCTCGTCGCC
GACGCTCCCA AGGCGGACGT GAACACTTAC TTTACGCGCC TGTATCGCGA GACCGCGAAC
ATCCTCACGA GTGACGACGA CAGTCTGCTC GGGTTCGAGA GCCGTGAGCA CACGGCGCAG
GTCGACAAGG ATCTACGGCT CTGGCGCGAG GCGCGGTTCC GTTGGGGCGA TGCTGGCAAA
CGCAACCTCG ACGTGTTGCG CGCGGATCAA ACCAATTCGC TGGAGGCTGA CACTTTCCTT
CCGGTGTTGT TCTGCTCGCC GACGATGGAA CTCGGCGTCG ACATTTCCGT GCTGAATGCC
GTCTACCTGC GCAACGCGCC ACCGACGCCG GCGAACTACG CGCAGAGGTC CGGCCGCGCA
GGACGCTCCG GTCAAGCCGC GCTCATCGTC ACCTACTGCG CGGCCCAAAG CCCGCACGAC
CAGTACTACT TCGCCCGGCG CGAGCAGCTC GTGGCCGGCT CCGTGCGACC GCCCGGCATC
GATCTCGCCA ACCGTGACCT GATCGAGGCG CATCTCAACG CCATCTGGCT GGCGAAGGCC
GGCATCGACG GGCGGCTGCG GCAGGAGCTG CCCGACGCCA TCCCAGACAT CCTAGATCTC
GATACGCCCA AACGCACGGT GCGTACCGAG ATCACCGACC GGCTCGCCAA TCCAGACCGC
GTGGTCGGCG TCGAGGACGA TTTTGAGCGG ATCCTGGGCA ACATCCGTGC TTCCATTCCG
CCGGCCGTCC TGAATGACCC CGGCAGCGAT TGGCTGAAGA ACTCCAAGCC GTTCGTGGCC
GATGTCGCAA AGACGGCGGC ACAGCGCTTC AACAACGCCT TCGGGCGCTG GCGCGATCTG
TACAATGCCG CCTTCGCGCA GATGGAGGAG GCCACCAACC AGATCAAGAA GCACGGTCTG
ACGAAGCAGG CCCGCGACGC CGCCGAGCGC GCCTTGCGCA TCGCCAACAG TCAGATCCGG
CTGCTGGAGC ACGGCGGGAA GTCGGATAAC TCCGACTTCG CCTCGCACCG CTATCTCGCG
ACTGAGGGCT ATCTGCCCGG CTACAACTTC CCGCGGCTGC CGCTCTATGC CTACGTGCCC
GAGCAGGGCT CCACCGGGCC GCGGGCAGCC TACCTCCAGC GGGCCCGCTT CCTGGCGATC
GCAGAGTTCG GACCGGGCTC GCTGATCTAC CACGAGGGTC GCGCCTTCAA GGTCGTCCGC
GCCAAGATCC CGCCGGACGT CCGCGACGCG CAGGGAATGC TGGCTGTTAG CAACCTCGCG
GTCTGGCGCG TGTGCCGCAC CTGCGGAGCG GGCCACGAGG GTGCTGGGCA GAATCTGTGT
CACGCCTGCG GCGCGCAGAT CGGCGGCGAC GGTTCGAAAC TCATCCAGAA GGTTCTGCGC
ATCGAGAACG TCGAGACAGT TCCGTCCGAG CGCATTACCG CAAACGAGGA GGCCCGCCGT
GGCCGCGGGT TCGAGATCCA GACGACGTTC ACGTGGGCCA AGCGCAACGG CCAGAGCGAC
GTCCTGACTG CCGTCGCCGA GGATGACGAC GGCACCGTCC TGGATCTGAC CTACGCCCCT
CGCGCCCAGA TCAGCCGGCT CAACCTCGGT CTCCGCAAGC GAAAGCCCGA GATAGGATTC
GGCTACCCGA TAGATCCGCA GAACGGCCAA TGGGTCGGGG CTGACCGCGA GCAGGACGAT
GACGATGCCG ATCCGACCGA GCCCGATCGT CCCGGAGCCG TGCGCGTCGT ACCCATCGTC
CAGGACCACA AGAATGCGGC CCTGCTGAAG CTCTTCGGCC CAGAGGCCCA GGAGACCACG
CTCGCCACGC TTCAATACGC GATCGCGCGA GGCTTGAGCC TCGTCTTCCA GGTCGAGGAA
GGCGAGATCG CTACCGAGGC AGTCCCGGAT CGCCGGAAGC GCAAGGCGAT CCTCGCCTAC
GAGTCCAGCG AGGGCGGGGC CGGTGTCCTC CGCCGCCTCG TCAGCGAAAA AGAGCGCTTG
GCCGAGGTCG CTCATCGCGC TCTGGAGGTC ATGCACTTCA CGCCGGACAG TATCGAGGAC
GCGCTGATCA CCCGCGACGC CTCAAAGTTG CAGGATCTCG ACGACGCCTT CTGCGTGCGC
GGCTGCTACC GCTGCCTGCT GTCATACTAC AACCAGATGG ACCACGCCCT CATCGACCGA
ACGGATGAAG GCGCTCGCAC GACCCTCGTG CGCCTCGCGG CCGGTGTGAT CCGGTCGACC
TCCGTGGTGT GCACTGCTGC GCCTGCAGCG GCGAGCACGG AGACGTGGCC GCAGGCACTC
GGTCGTTGGG GGCTGCCGCC GTTCGACGCC AAGCGGTTGA AGTTCGACAC CGACGGCATC
CTCGACGTTT GGCGCAGCCA CCACGTCGCG ATTGCCTATG CGCCGCCGCC GCAGGACGTT
GTCGACGAAC TCGAAGACGG CGGTTGGACG CTCGTGGTGC TCACAGGAGT TCCCGAGCAA
GACCCGCCAT CTACCCTCTC GTCGCTGTTC AAGGTCGCGG CATGA
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| Protein sequence | MDAFGLDQTL IRDYDAFARS FNKIAADDIR TEVDRLYDSK AFWPDPLITI NPHFARGETL
DDLVKDDVLH PLTTHVFRER GRVLKPHLHQ VEALTKAKAG KSFVVTTGTG SGKSLCYFLP
IIDEAIRERQ KPDFKPRTRA IVVYPMNALA NSQFEGLTEF LNQCGIPEAQ RPRVRIYTGQ
ESREKREEVR DNPPDILLTN FMMLELLLTR QSELDAQVIG NARGLRWIVL DELHTYRGRQ
GADVAVLVRR LRDQLCRGHS EPVCIGTSAT MATPDQGNPI KAVAKVASDL FGVSVETDCV
IEETLQRATD EDLTVASVQG QLAACIQNPV PTNATDAELK IHSLAVWIEL RIGLEYKPQL
KRRPPMTLVD AAKALSDETG CDAELCEQRL REMLGLLARP GAERGGTGSR AFLAFKLHRF
ISGAGLVYTT LRTAGPTGIR RVTLKGQTHH PDDKTALLFS THFCRDCGHE YHPVMRLDDE
DGDRFVARSI DDPISERETD SGTAGYLVPE PATINEFFQG ALDEYPDEWV EHTPRGSRLK
STRRKQQVAA AVVLPNGRVD AAGRQAWFIP GRWRFCLNCK LEAQPGTREQ NKLAGLTAEG
RSSATTLIVS SLLRFMHRPE AKIADDKRKV LGFSDNRQDA ALQAGHFNDF IFTTLLRAAV
LSAVQAAGPD GLAEAEYGMA VQKALGFEDN NDDRRRHWMR SPDAVGPSRA RAITDLTRVL
SHRVWSDQRR GWRYTNLNLE NLQLIRAHYP GLESCADESL FKDAPLLRSL KPDARRRVFH
ALFEVMRGEL AVESDFLKKA TTESLGRSSR DNLRTPWAIS EQEAVSNAGL LIVPEGAGGK
AQPNGRGPDS RLITAGPNSR VGKKLRHGHL WGGRRLTVHE YNELLESVVR IAKVQNWVRE
VSEYGITGLR LLPSAIRLVA DAPKADVNTY FTRLYRETAN ILTSDDDSLL GFESREHTAQ
VDKDLRLWRE ARFRWGDAGK RNLDVLRADQ TNSLEADTFL PVLFCSPTME LGVDISVLNA
VYLRNAPPTP ANYAQRSGRA GRSGQAALIV TYCAAQSPHD QYYFARREQL VAGSVRPPGI
DLANRDLIEA HLNAIWLAKA GIDGRLRQEL PDAIPDILDL DTPKRTVRTE ITDRLANPDR
VVGVEDDFER ILGNIRASIP PAVLNDPGSD WLKNSKPFVA DVAKTAAQRF NNAFGRWRDL
YNAAFAQMEE ATNQIKKHGL TKQARDAAER ALRIANSQIR LLEHGGKSDN SDFASHRYLA
TEGYLPGYNF PRLPLYAYVP EQGSTGPRAA YLQRARFLAI AEFGPGSLIY HEGRAFKVVR
AKIPPDVRDA QGMLAVSNLA VWRVCRTCGA GHEGAGQNLC HACGAQIGGD GSKLIQKVLR
IENVETVPSE RITANEEARR GRGFEIQTTF TWAKRNGQSD VLTAVAEDDD GTVLDLTYAP
RAQISRLNLG LRKRKPEIGF GYPIDPQNGQ WVGADREQDD DDADPTEPDR PGAVRVVPIV
QDHKNAALLK LFGPEAQETT LATLQYAIAR GLSLVFQVEE GEIATEAVPD RRKRKAILAY
ESSEGGAGVL RRLVSEKERL AEVAHRALEV MHFTPDSIED ALITRDASKL QDLDDAFCVR
GCYRCLLSYY NQMDHALIDR TDEGARTTLV RLAAGVIRST SVVCTAAPAA ASTETWPQAL
GRWGLPPFDA KRLKFDTDGI LDVWRSHHVA IAYAPPPQDV VDELEDGGWT LVVLTGVPEQ
DPPSTLSSLF KVAA
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