Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_0208 |
Symbol | |
ID | 5831085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 226402 |
End bp | 227358 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641365993 |
Product | ThiJ/PfpI domain-containing protein |
Protein accession | YP_001637705 |
Protein GI | 163849662 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0903161 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGGCAGG TCGGGTTCAT CCTCGAGGAC GGGTTTCAGG TGATGGGGCT CGCCGCCCTG TCGGCGTTCG AGTTCGCCAA CACGGACCTT GGCCGGGAGG CCTATGGGCT GCGCGTCATG TCGGAGCGGG GCGGCACCGT CCGCTCCTCG CTGCGCATCG GCATCGAGAC CGTGCCGCTG GCGGAGGCCC CCGACACGCT GATGGTCGTC GGCGAGTTGC AGCCGCGCCC GCTCTCGCCG GGCCTGCGCG CCTACATCGC CGAGGCCGGC CGGACCTCGC GGCGCGTGGC CGGGCTCTGT ACGGGGGCCT TCGCGCTGGC CGAGGCCGGG TTGCTCGACG GCCGGGTGGC GACGACCCAC TGGGCCCATG CCCGCGACAT GCAGGAGCGC TTCCCCCTGA TCCGCGTCGA TGACGACCGC ATCTTCGTGG CCGACGGGAA CGTCTGGACC TCGGCGGGGA TGAGTGCGGC GATCGACCTG ACGCTGGCGC TGATCGAGGA CGACCACGGC GCGGAGCTCT CCCGCGCCAT CGCCCGCAAG CTCGTCGTCT ATCATCGACG CCCCGGCGGT CAGTCACAAT TCTCGGCCCT GCTCGAACTG GAGCCGCGCT CCGATCGGAT CCGCCGTGCC CTCGTCTACG CCAAGGAGAA CCTGCGCCGC CCGCTGACTG TCGAGGAGAT GGCGGAGGCC GCGCGCGTCA GCCCGCGCCA GTTCAGCCGG GTGTTTCGCG AGGAGACGGG TCAATCCCCG GCCAAGGCCG TGGAGCGGCT GCGGCTCGAG GCCGCCAAGG CCATGCTCGA GGATGGACGC CACTCCCTCG ACGTGGTCGC GCGCGATACC GGCTTCACCG ACCGCGACCG CATGCGCCGC GCCTTCCTGC GCGCCTTCGG CCACCCGCCG CAGAGCCTGC GCCGGAGCCT GCGCCTGATC GAGGGCGGCG GCGAAGCAGC CGGATGA
|
Protein sequence | MRQVGFILED GFQVMGLAAL SAFEFANTDL GREAYGLRVM SERGGTVRSS LRIGIETVPL AEAPDTLMVV GELQPRPLSP GLRAYIAEAG RTSRRVAGLC TGAFALAEAG LLDGRVATTH WAHARDMQER FPLIRVDDDR IFVADGNVWT SAGMSAAIDL TLALIEDDHG AELSRAIARK LVVYHRRPGG QSQFSALLEL EPRSDRIRRA LVYAKENLRR PLTVEEMAEA ARVSPRQFSR VFREETGQSP AKAVERLRLE AAKAMLEDGR HSLDVVARDT GFTDRDRMRR AFLRAFGHPP QSLRRSLRLI EGGGEAAG
|
| |