Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_0132 |
Symbol | |
ID | 5834126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 142801 |
End bp | 143355 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641365916 |
Product | sigma-70 region 2 domain-containing protein |
Protein accession | YP_001637630 |
Protein GI | 163849587 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACACCC TGATCGCAGG AGGGCTCGGC TTGGCCACGG GCCAACCGGT CGCACTCAGT CCGTCCAGCC TGCCCGCAGC CGTGCGGGAT CACCTTGGGC ATCAACTGCA AGCGGCCTAC GGGGCGCTGA TCGCTGTGCA GCCGCCGCAG CGCTTGCTTG ACCTCATCGC ACAGCTCTAC AGCGCGCTGA GCACCCACGA CCAGGAGAGC GCGGCGTCCT TCCGCCATGG CCTGATTGAG GCTGTTCCCG GTCTGCAGGC CTTCGCAATG TCGCTGGTCG CGAACGAGGT CCGCACTGGC GATCTCGTGC AGGAGACGCT GCTGAAGGTA TGGGCCAAGC AGGCGACGTT CGTGCCGGGC ACGAACCTGA AGGCGTGGCT GTGCACCATT CTGCGCAACC ACTTCTACAG CGAAATCCGC AAGTACAAGC GCGAGATCGA GGACGCGGAT GGCGCGATGG CATTGCAGCT GCAAGCGCCA GCTTCCCAAG AGCATGGCTC GGACTTGCAG GTGGTCATGG TGTGCGTCGG AGGCGAGATC CTCAGCCTTC CCTGA
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Protein sequence | MDTLIAGGLG LATGQPVALS PSSLPAAVRD HLGHQLQAAY GALIAVQPPQ RLLDLIAQLY SALSTHDQES AASFRHGLIE AVPGLQAFAM SLVANEVRTG DLVQETLLKV WAKQATFVPG TNLKAWLCTI LRNHFYSEIR KYKREIEDAD GAMALQLQAP ASQEHGSDLQ VVMVCVGGEI LSLP
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