| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_0125 |
|---|
| Symbol | |
|---|
| ID | 5834192 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 135015 |
|---|
| End bp | 135866 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641365910 |
|---|
| Product | porin |
|---|
| Protein accession | YP_001637624 |
|---|
| Protein GI | 163849581 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3637] Opacity protein and related surface antigens |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAAGA CAGTTTTGGC GCGAAGCGCC GCTGCGTTCG TTTCGACGGC AGCAGTTGCG
GCCGATTTGC CCCAGCGCGA ACAGACACCA GTTTTCGCAC AAATTCCAGC TTTTACTTGG
TCCGGCTTCT ACGCAGGTAT TGCCGCCGGC TACGCCTTCA GCGGCAGACA GACTGTTCGA
ACCACAGACT TCACACCGAT AGGTCAAGCC GTTCTTGCTG CGAGTGGGTT CGGTGCAGTG
CGATCTGAGC AGGAGGGCGC CACTGTTGCC GGCGGCTTCG GCTATAATTA CCAGTTTACG
CCTGGCACTG GATTCGTGGC GGGTATCGAA ACTGATATTC AGTACACTGA TCTTGATAGC
TCGCGCGCGA CGAGCGCTTC CGTTGGGGGA ACGACGTTCT TCCTCTCTGG GCGCCAAAGT
CTGAATTTTC TAGGCACAGT TCGCGGTCGC TTGGGATATG CGTTTAACCG CGTTCTTGTC
TACGGAACTG GCGGCTTTGC CTACGGCAAC GTCAACTACG AGATCAACGC CAATGTTACT
TCAGCTCTTG GCACTATCCC CTTCGACGCA GGCCGCTTCA ACAATGTCGA GACGGGATAC
GTATATGGGG GCGGTGTCGA ATACGCGATG CCAACCGAAA GCTTTCTAAA TTTCTTTAGT
GCAAATGCAG TAATTATCAA GGCGGAGTAC CTCCACTACG ACCTTGGGAG TCGCAGTGTT
TTCAACTCTG GCGTCGGTCC TGTGTTCGGT CCCGGCGGTT CTTTAGCTGT AGGACTTACT
TCCGTGTCGC GGTTCCGGAC AGAGGGCAAT ATTGTTCGCG CTGGCGTCAA TTATAAATTT
GGAACCTACT GA
|
|---|
| Protein sequence | MLKTVLARSA AAFVSTAAVA ADLPQREQTP VFAQIPAFTW SGFYAGIAAG YAFSGRQTVR
TTDFTPIGQA VLAASGFGAV RSEQEGATVA GGFGYNYQFT PGTGFVAGIE TDIQYTDLDS
SRATSASVGG TTFFLSGRQS LNFLGTVRGR LGYAFNRVLV YGTGGFAYGN VNYEINANVT
SALGTIPFDA GRFNNVETGY VYGGGVEYAM PTESFLNFFS ANAVIIKAEY LHYDLGSRSV
FNSGVGPVFG PGGSLAVGLT SVSRFRTEGN IVRAGVNYKF GTY
|
|---|
| |