Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_0081 |
Symbol | |
ID | 5835763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 88725 |
End bp | 89294 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641365866 |
Product | integrase family protein |
Protein accession | YP_001637580 |
Protein GI | 163849537 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAAG CCCGGGTCCC CACCGAGGCG GAGTTCAAAC GCTTGGTGGC GGTGGCCTCG CAGGGCCGAC ACGGTCCCCG GAACCGGGCT GCGCTCATGC TGAGCTACCT GGCGGGCCTG CGCGTGGGCG AGATTGCGTC GCTCCGTTGG GGTGATCTCC TTGATGGCGG CGGTAAGGTG CGCGAGCAGC TCCGGCTCGG GGCGGCCGTG ACAAAGGGCG GCCACGCGCG TGTCGTGTTC CTGAATGCGC GCCTGCGTAG GGAGATTGAG CAGTACCGTG GCACCCTCGG GCAGCCCCCT GCCCTGCTGC AGCCGGTGCT GATCACACAG AAGCGCTCGG CGTTCAGCGC CAACACGCTG TGTCAGCTCA TGCGCAGCTG GTACGATCAG GCTGGCCTGG ACGGCGGCTC CAGTCATAGC GGTCGGCGCT GGTTCATCAC CCGCCTAGCG CATTCCGGTA TCTCGCCGAA GGCGATCATG ATGCTAGCCG GACACCGGCA TCTCTCGACA ACGCAGCGCT ACATTGATGT CAACGACGAA ATGATGCGCG CTGCGGTCGA GGTACTCTGA
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Protein sequence | MKQARVPTEA EFKRLVAVAS QGRHGPRNRA ALMLSYLAGL RVGEIASLRW GDLLDGGGKV REQLRLGAAV TKGGHARVVF LNARLRREIE QYRGTLGQPP ALLQPVLITQ KRSAFSANTL CQLMRSWYDQ AGLDGGSSHS GRRWFITRLA HSGISPKAIM MLAGHRHLST TQRYIDVNDE MMRAAVEVL
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