Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_0040 |
Symbol | |
ID | 5835560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 46285 |
End bp | 48720 |
Gene Length | 2436 bp |
Protein Length | 811 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641365824 |
Product | putative phosphoketolase |
Protein accession | YP_001637539 |
Protein GI | 163849496 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3957] Phosphoketolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.383665 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGCGA TCCTCAAAGC TCGGCGGCAG CCCAAGCGCA CGGCGCGGAC ATCCGAGCTG GCCCTGATCG ATGCCTACTG GCGGGCGGCA AACTACTTGT CGGTCGGTCA GATCTACCTC TACGACAACC CGCTACTGGT GGAACGACTG ACCAAGGAGC ACATCAAGCC GCGTCTACTC GGCCACTGGG GAACCACTCC GGGTTTGAAT TTCATCTATG TTCATCTGAA TCGTCTTATT AAAAAGCATG ATCTTGATGT TATCTATATT ACAGGGCCGG GGCATGGCGG TCCTGCCTTG ATCGCCAACG CATACCTCGA GGGGACTTAC AGCGAAGTCT ATCCGAACAT CTCCGCCGAT GCTGAGGGCA TGAAGCGCCT CTTCAAGCAG TTCTCCTTCC CAGGCGGCAT CCCGAGCCAT GTGGCTCCTG AAACACCGGG CTCGATGCAC GAAGGCGGAG AGCTGGGCTA TTCCCTCTCG CACGCCTACG GCGCCGCGTT CGACAACCCC GACCTCATCG TCGCTTGCGT CGTCGGCGAT GGCGAGGCCG AGACCGGGCC TCTTGCCACA AGCTGGCATT CGAACAAATT TCTCAACCCC GTGAGCGATG GGACGGTTCT GCCGATCCTG CACCTCAACG GGTACAAGAT TGCCAACCCG ACTGTACTGG CCAGAATTAG CCACGCGGAG CTTGAACATC TCTTCCGTGG GTACGGGTAC ACCCCCTACT TCGTGGAAGG ACATGATCCG GCCGAGATGC ACCAGCGCAT GGCCTCCACC ATGGATGCTG TCCTGCGGGA CATTCGCCGG ATCAAGTCGG ACGCGCGCGA CAAGGGTTTC ACGGGCCGGC CGTTCTGGCC GATGATCGTT CTTCGGACGC CAAAAGGATG GACATGTCCG AAGGAAATCG ATGGACGGCG CACAGAGGAT TACTGGCGCT CGCACCAAGT GCCAATGGGC GAGATGCACG ACAATCCCGC CCATGTGCGC ATGCTCGAAG ACTGGATGCA ATCTTATCGG CCCGCCGAGC TCTTCGACGA AGGCGGCCGA CTTCGCTCGG AACTTGCCGA GCTTGCCCCG ACGGGCGACC GCCGCATGAG CGCCAATCCG CATACCAATG GAGGCACTCT GCTCCGCGAC CTGCGGCTCC CGGATTTTCA CGACTATGCA ATACCGGTGA CCGCCCCCGG TGCCGCCGTC GCCGAGTCCA CGCGCGTGAT GGGACGCTTC CTCCGCGACG TCATGGACCT GAACGCAGAA GCGCGAAACT TCAGGCTGTT CAGTCCGGAC GAGAATAACT CAAATCGCTG GCAGGACGCG CTCGAGGTGA CCAACCGCGC CTGGGTGGCC GAGACGTATC CCTGGGATGA TCACCTCGCG CATGACGGCC GCGTGATGGA GATGCTGAGC GAGCATCAAT GTCAGGGCTG GCTCGAAGGC TATCTGCTGA CGGGTCGGCA CGGCTTCTTC TCGTGCTACG AGGCCTTCAT CCACATCATC GACTCGATGT TCAATCAGCA CGCCAAGTGG CTGAAGGTCT GCAACCATAT TCCGTGGCGG CGACCCATTG GGTCTTTGAA CTACCTTCTC TCCAGCCACG TCTGGCGTCA GGATCACAAC GGGTTCAGTC ATCAGGATCC AGGCTTCATC GACCATGTCG TGAACAAGAA AGCCGAGGTC GTTCGTGTCT ACTTACCACC GGATGCGAAT TGTTTGCTTT CCGTAACCGA TCACTGCTTG CGAAGCCGCA ACTACGTCAA CGTGATCGTC GCGGGTAAAC AGCCAGCACC CCAGTGGCTC ACGATGGATC AGGCGGTCAA GCACTGCACC GCCGGGCTTG GGATCTGGGA ATGGGCGAGC AACGACCGCG GCAGCGAGCC GGACGTCGTG ATGGCGTGCT GCGGGGATGT GCCGACCCTT GAAACGCTCG CGGCCGTCGA CCTCCTCCGC TGCCATGCGC CGGATCTCAA GGTGCGCGTC ATCAACGTCG TGAACCTGAT GAAGCTGCAG CCCGACACGG AGCATCCACA CGGCCTGTCA GATCAGGATT TCGATGCCCT GTTCACGACG GACAAACCGG TCGTCTTCGC CTTTCACGGG TATCCTTGGC TCATTCACCG GCTGGTTTAC CGACGTCACG GACACAGCAA CTTCCATGTG CGTGGCTACA AGGAGGAAGG CACGACGAGC ACGCCGTTCG ACATGTGCGT GATGAACGAC ATGGATCGGT TCCATCTCGT CAGCGATGTC ATCGACCGGG TGCCGGGCCT GGCCGCTCGG GCGGCCTACG CCAAGCAAGC GATCCGGGAC AAGCTAATCG ACCATCGCGC GTACATTCAT CGGCACGGCG ACGACATGCC GGAAGTATCC GGCTGGTCCT GGAGCCCGAT GGCGACGACG CGCGGTCTCG GCTCGACGGA GAGTGACAAT GTGTGA
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Protein sequence | MDAILKARRQ PKRTARTSEL ALIDAYWRAA NYLSVGQIYL YDNPLLVERL TKEHIKPRLL GHWGTTPGLN FIYVHLNRLI KKHDLDVIYI TGPGHGGPAL IANAYLEGTY SEVYPNISAD AEGMKRLFKQ FSFPGGIPSH VAPETPGSMH EGGELGYSLS HAYGAAFDNP DLIVACVVGD GEAETGPLAT SWHSNKFLNP VSDGTVLPIL HLNGYKIANP TVLARISHAE LEHLFRGYGY TPYFVEGHDP AEMHQRMAST MDAVLRDIRR IKSDARDKGF TGRPFWPMIV LRTPKGWTCP KEIDGRRTED YWRSHQVPMG EMHDNPAHVR MLEDWMQSYR PAELFDEGGR LRSELAELAP TGDRRMSANP HTNGGTLLRD LRLPDFHDYA IPVTAPGAAV AESTRVMGRF LRDVMDLNAE ARNFRLFSPD ENNSNRWQDA LEVTNRAWVA ETYPWDDHLA HDGRVMEMLS EHQCQGWLEG YLLTGRHGFF SCYEAFIHII DSMFNQHAKW LKVCNHIPWR RPIGSLNYLL SSHVWRQDHN GFSHQDPGFI DHVVNKKAEV VRVYLPPDAN CLLSVTDHCL RSRNYVNVIV AGKQPAPQWL TMDQAVKHCT AGLGIWEWAS NDRGSEPDVV MACCGDVPTL ETLAAVDLLR CHAPDLKVRV INVVNLMKLQ PDTEHPHGLS DQDFDALFTT DKPVVFAFHG YPWLIHRLVY RRHGHSNFHV RGYKEEGTTS TPFDMCVMND MDRFHLVSDV IDRVPGLAAR AAYAKQAIRD KLIDHRAYIH RHGDDMPEVS GWSWSPMATT RGLGSTESDN V
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