| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mevan_1488 |
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| Symbol | |
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| ID | 5325302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus vannielii SB |
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| Kingdom | Archaea |
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| Replicon accession | NC_009634 |
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| Strand | - |
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| Start bp | 1510118 |
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| End bp | 1511290 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640787182 |
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| Product | tRNA pseudouridine synthase D TruD |
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| Protein accession | YP_001323994 |
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| Protein GI | 150400227 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0585] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00094] tRNA pseudouridine synthase, TruD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGTTAA ATATTGAAAA ATATATACTT AAAACGAATA GATTTGGGGG AACTTTAAAA
AAATATCCTG AAGACTTTAT TGTAGAAGAA ATAATGCCTG ATGGAACAGT TTTAGAAGTT
GGAAAAGAAA TTGATTTTTT AGATGAAACT CCTTGGAACG GTTCATTTAT CCATTTTACC
CTTGAAAAAC GAAATTGGAA CACTATGGAT GCATTAAGTG CAATTGTAAG GGCGACTAAA
ACTAAACGGA AAAATTTTGG ATTTGCTGGA ACAAAAGACA AATTTGCAGT AACTACTCAG
AGAATGGGAT GTTTTGGGCT TAAAAAAGAA CAGCTTGAAA GCGTTAAAAT TCCTGAAATA
ATAATAAAAG ATATTCAAAA GTCTAATAAA AAGCTTAGAA TGGGGGACCT CTTTGGAAAC
CGGTTTACGA TAAACATAAG AGATATTGAA AAAAAATATA TGGAATTAGA AAACCTTTCA
GATCTTAAAC TTGACCATGT TTTAAATTAT TTTGGAATAC AGCGTTTTGG GCTTAAAAGG
CCTATTACCC ATATAGTTGG AAAATTTATA TATGAGAGAG ATTTTGAAAG TGCATTTTAC
ACATACTGCG GAACCCCAAT AAGTGAAACG GGTGATGAAA AGGAGGCACG GGAACTTGTT
GATTCAGGAA ATTTTAAGGG CGCATTAAAA CTATTTTCCA AAGGAAATGA ATATGAAAAA
AGATTAATTC AACAGTATTT TAAATATAAG GACTTTAAAA TGGCGTTTAC CGCACTTCCT
CCGCAATTAA ATAGTATGTT TGTAAATGCT TACCAAGCAT ATCTTTTTAA TGAAATGGTA
AATGAAAGGT ATAACTTTGG ATTTGAACCA CTTACGGGAG ATATTTTAGA AGATAATATA
CCAACTGGGG CATTAATTGG TTACAATACA GAATTTGGTA AAGGAATTCA GGGCGAAATT
GAAAAAGAAA TATTTAATCG TGAAAACATT GACTTAAAAA AATTTAAAAT AGAAGATTTT
GGAAATTTCT ATGGGACAAG ACGAAAATTA ATTACCCCAG TTTACGACTT TAAAAGCGAA
TTTAAGGAAA AAGTGCTTAC TTTAAGCTTT AAATTAGAGC GGGGAAATTA TGCAACGATT
GTAACTAGGG AATTTACTGG AAATTTAGGT TAA
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| Protein sequence | MPLNIEKYIL KTNRFGGTLK KYPEDFIVEE IMPDGTVLEV GKEIDFLDET PWNGSFIHFT
LEKRNWNTMD ALSAIVRATK TKRKNFGFAG TKDKFAVTTQ RMGCFGLKKE QLESVKIPEI
IIKDIQKSNK KLRMGDLFGN RFTINIRDIE KKYMELENLS DLKLDHVLNY FGIQRFGLKR
PITHIVGKFI YERDFESAFY TYCGTPISET GDEKEARELV DSGNFKGALK LFSKGNEYEK
RLIQQYFKYK DFKMAFTALP PQLNSMFVNA YQAYLFNEMV NERYNFGFEP LTGDILEDNI
PTGALIGYNT EFGKGIQGEI EKEIFNRENI DLKKFKIEDF GNFYGTRRKL ITPVYDFKSE
FKEKVLTLSF KLERGNYATI VTREFTGNLG
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