Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mevan_1049 |
Symbol | |
ID | 5325416 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus vannielii SB |
Kingdom | Archaea |
Replicon accession | NC_009634 |
Strand | - |
Start bp | 1068220 |
End bp | 1069881 |
Gene Length | 1662 bp |
Protein Length | 553 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640786726 |
Product | type II secretion system protein E |
Protein accession | YP_001323562 |
Protein GI | 150399795 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.487211 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGACTGT TTGATAGGAT TCAAAAATCC GATAAACCAG CTATTGCTAA AAAAGATTTA GCTGAAAGTA ATATAAACAC CCCAAATATT TACGAAAATA AAGAAAATAG TTTAGAAGAC ACAAAACAGG AACCTCCCAA AAAAGTTGGT TTTTCGATAT CCCGCGATAT AAAAAAACAA GAAATAGAAA ATTTTACTAG TGATTCAAGG TCCACTATTT TAGATAAGTA TTTTGTAAGA GTTGATGAAA TCGATTTTGA TATTATTATC GAAAAAGAAG AAGGAGTTAC AAAGTATAAA ATACCCGAAA TTACATTAAT GAACACCGCC CTTTCAAAAT TCTCTGAACT GGATATAAAG ACTATTAAAG CAGAATTATC AGAATCATCA CTACAGAAAT TAGGGCAAAT TCAAGGATAT TTAAAAAGTT TTTCAGAAAA AAATAACTTA CATTTAAGGG ATATTGAAAT ACTTCATTTA TCGCACTATT TTTACTTAAT TATTGGAAAA CTTGGACTTT TAGAAATTCC ACTAAATGAT GATAGTCTAG AAGAATTAAT GGTAAATGGA ATTGATTCTC CAGCATATGT ATTCCATAGA AAATACCAAA TGTGTGAAAC AAACATACGT TCAGATCGCC ACGAAGCAAC AAGAGTTGTT GAAAGTATTG CATACCTTGC AGGAAGAACT ATTGATTCTA GAACGCCATT ACTTGACGCT TTTTTACCTG ATGGAAGTAG AGTAAATGCA ACAATGCAAG ATGTAACTCT TAGGGGGAGT ACAATTACAA TTCGTAAATT TAGTGCAGAC CCCTTAACAA TTGTTGATTT AATAAGATAT GGAACTTTTG ATTTAGAACT TGCATCTTTC CTTTGGCAGG CTGTTGAAGG ATATTTTGGT TCAAAACCAG CAAATACCTT AATTGTTGGT GGTACAGGTT CAGGTAAGAC TACAACATTA AACGTTGTTT CAATGTTTTC AATGTATAAC GATAGAATTA TCACTGTTGA AGATACGCCA GAGTTGCAAG TACCGTTAAA TCACGTTATA AAAATGATTA CAAGGCCCGG AAGACCTGGA ATTCAAGGTT ATGAAATTAC AATGGATGAT TTAATTAAAA ACTCACTTAG AATGAGGCCA GACCGGATTT TTGTAGGGGA AGTAAGGGGT AGTGAAGCCC ACTCTCTGTT GGTTGCAATG AATACTGGAC ATGATGGTTG TTCAGGGACT TTACACGCAA ACAGTGCAGA TGAAGCAATA ATAAGACTTA TTAACCACCC GATGAGTGTT CCAAAGGTTA TGCTTTCTTC AGTTGATTTT ATTATAAACC AGCAACGAAT TAAGAGAAAT AAGAAAACCA TAAGAAGAAT TTTAGGGGTT GTTGAAATTG GCGGAAGTGG TGAAAATATT ACCAAAACCG AGTTATTTAA GTACGACGGT GTAAGTGACA GTGTTGTAAA AACGGGAATT TGTATGTGGG AAGAAGAAGT CTGTGCAATT GCAGGAATTA CAAGGGATGA ATTAATGGAT GATCGAATAA ATAGAAAAAA AGTATTAAAG TATATGGTAA ATAACAATAT TAACGGAATT AAAAAGGTAG GGGATGTAAT TAAACAGTAT CAAGAAAACC CAGAAAATGT TTTAAAGCAT ATACTGGAGT AG
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Protein sequence | MGLFDRIQKS DKPAIAKKDL AESNINTPNI YENKENSLED TKQEPPKKVG FSISRDIKKQ EIENFTSDSR STILDKYFVR VDEIDFDIII EKEEGVTKYK IPEITLMNTA LSKFSELDIK TIKAELSESS LQKLGQIQGY LKSFSEKNNL HLRDIEILHL SHYFYLIIGK LGLLEIPLND DSLEELMVNG IDSPAYVFHR KYQMCETNIR SDRHEATRVV ESIAYLAGRT IDSRTPLLDA FLPDGSRVNA TMQDVTLRGS TITIRKFSAD PLTIVDLIRY GTFDLELASF LWQAVEGYFG SKPANTLIVG GTGSGKTTTL NVVSMFSMYN DRIITVEDTP ELQVPLNHVI KMITRPGRPG IQGYEITMDD LIKNSLRMRP DRIFVGEVRG SEAHSLLVAM NTGHDGCSGT LHANSADEAI IRLINHPMSV PKVMLSSVDF IINQQRIKRN KKTIRRILGV VEIGGSGENI TKTELFKYDG VSDSVVKTGI CMWEEEVCAI AGITRDELMD DRINRKKVLK YMVNNNINGI KKVGDVIKQY QENPENVLKH ILE
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