| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mevan_0390 |
|---|
| Symbol | |
|---|
| ID | 5325673 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus vannielii SB |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009634 |
|---|
| Strand | - |
|---|
| Start bp | 444639 |
|---|
| End bp | 446123 |
|---|
| Gene Length | 1485 bp |
|---|
| Protein Length | 494 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640786054 |
|---|
| Product | succinate dehydrogenase/fumarate reductase iron-sulfur subunit |
|---|
| Protein accession | YP_001322910 |
|---|
| Protein GI | 150399143 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0247] Fe-S oxidoreductase |
|---|
| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.573606 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACACAG TTAAAATAAA CGTGAAAAAA ACCGAAGGAT TTAAAGAATT TATTGTACCT
GAAAAAATAA CTGTAACTGA CGCTTTAGAA TATATTAATA AAAATTACGG CGAAAATATA
CAGTTTAGGG TATCCTGTAG GGCAGGCCAA TGTGGGAGCT GTGCAATGAC AATAAATAAA
AAATCAAGGC TTGCATGTAA GACAAAAGTT GAAGATAAAA TGTATATTGA GCCCTTAGAT
GGATTTGACG TTATTATTGA CCTCGTAGTT GATAGAAGTC CGTACTATAA AAAACTAGGA
ACATTGAAAA ATTACATTCA GCAAAAAAAC GGTAAACCTA ACCTTGAAGA ACTATCAAAT
TTAAAGATAT ATCCTAACGA TATTAAAGAT GTTAAATCGA TTAGAGGATG CATTGAATGT
TTAAGCTGTA TTTCAATGTG TCCTGCGAGA AAATATTCTA ATTATCCTGG GCCTACATTT
ATGAGACAGC TTGCAAGGTT TGCTTTTGAC AAAAGAGATG ATTCAAAACG GGAAAGCGAT
GCATTTAACG AAAATATTTA TAACTGTACA ACTTGCGGTA GATGTGTTGA AGTCTGTCCA
AAAGAAATCG ATATTGTACA TAATGTAGTT GAAAAATTAA GGGAAAAGAC ATTTAAAAAA
GGATACAATC TTGAAAGCCA TTTAGAAGTT AGAAAAAACG CATTACTCCA AAAAAGGTCA
ATTCCAAAAG ATAAATCTTC ATTTTTAGAG GAAGTAAAAG ATGAATATTT TGTAGAAAAT
GAAAAATTGC GTGTTGCATT TTTTACAGGA TGTTTGGTCG ATTTTAGACT TTTAGAACTT
GGAAAAAGTG CAGTAAGGGT TTTAAATGCA CATGGTGTTT CAGTAGTAAT TCCAAAGTTA
CAGGTATGTT GCGGTTCCCC ATACATTAGA ACTGGTCAGA CGGATATCTC AGAAATGTTA
AAAAAACAAA ACCTCGAAAT TTTTAATAAG TTAAATGTTG ACTATGTTGT TACTCTTTGT
GCAGGGTGCG GAAGCACTTT AAAGAATGAT TACAAAGAAA AAGAGTTTAA GATAAAGGAT
ATTACTGAAA TTTTAACAGA AGTTGGATTA ATTGAGTATA AGCCTTTAGA TATTACAGTA
ACTTACCACG ACCCATGCCA CTTGAGACGA GGTCAAAAAG TATATCTTGA ACCTAGGAAA
ATTTTAGAAA GCATTCCAAA ATTAAAATTT GTTGAAATGG AAATTCCCGA CCAGTGCTGC
GGTGCAGGAG GGGGAGTTCG TTCTGGAAAG CCAGAAGTTG CAGCTTTAAT CGGGAAAAGA
AAAGCAAATA TGGTATATAA AACAGATGCA GATTATGTAA TTACGGTATG CCCATTTTGC
GAATATCACG TTAGGGACAG CTTGAAAAAA TACATGGAAG AAAACAGTTT TAAAAAAGAA
ATTCCTGTAA TGAATATAGT TTCACTACTT GATAAAGTGA TTTAA
|
|---|
| Protein sequence | MNTVKINVKK TEGFKEFIVP EKITVTDALE YINKNYGENI QFRVSCRAGQ CGSCAMTINK
KSRLACKTKV EDKMYIEPLD GFDVIIDLVV DRSPYYKKLG TLKNYIQQKN GKPNLEELSN
LKIYPNDIKD VKSIRGCIEC LSCISMCPAR KYSNYPGPTF MRQLARFAFD KRDDSKRESD
AFNENIYNCT TCGRCVEVCP KEIDIVHNVV EKLREKTFKK GYNLESHLEV RKNALLQKRS
IPKDKSSFLE EVKDEYFVEN EKLRVAFFTG CLVDFRLLEL GKSAVRVLNA HGVSVVIPKL
QVCCGSPYIR TGQTDISEML KKQNLEIFNK LNVDYVVTLC AGCGSTLKND YKEKEFKIKD
ITEILTEVGL IEYKPLDITV TYHDPCHLRR GQKVYLEPRK ILESIPKLKF VEMEIPDQCC
GAGGGVRSGK PEVAALIGKR KANMVYKTDA DYVITVCPFC EYHVRDSLKK YMEENSFKKE
IPVMNIVSLL DKVI
|
|---|
| |