| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mevan_0337 |
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| Symbol | |
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| ID | 5325920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus vannielii SB |
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| Kingdom | Archaea |
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| Replicon accession | NC_009634 |
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| Strand | - |
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| Start bp | 385298 |
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| End bp | 386191 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 640786001 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_001322858 |
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| Protein GI | 150399091 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0186274 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAACT ACAAAATTTT AAGTCGAAAA GTCGAAAAGA AAAATGCAGG AAAAAAATTA
AGCGATTTTT TATCTGAAGA CTTTGAACTT TCAAACAAAA TGATAAAAAA ATACGATAAA
GAAAAGAAAA TTTTTGTAAA TTCTAAAAAT ATTTCTTTAA AATCCAAATT AGTGGAAAAT
GAAGTGGTTT ATGTTAATAT TGATGCTGGA AATAATACCA TAATTGCTGA AGAAATTCCA
ATTTCTGTAA TTTATGAAGA TGAATACGTA ATGATTATTG ATAAACCAAA AAATATGGTT
GTTCATGAAA CGAAAAATGT CGTTTCAGGG ACTCTTTCAA ATGCAATTTC AAATAGGCAG
AAAGTAAATA ATCAGAATTA CAAAATAAGG TTCGTAAACC GACTAGATAT GGATACAACT
GGAATTTTGA TAGTTGCAAA AAATCCTTAT TCTCATTATC TAATTTCAAA GCAGATGGAT
GAAGGAATTT TTGAAAAAAA GTACATCTGT GTAGTAAATG GACATTTAAG ACTTAAATCC
GGAATAATTA GTAACCCATT GGATTTGGGT GAAGATGGCA TTAAACGAGA ATTAAAAAAT
ACTGGAAAAG AATCAAAAAC AAAATATACT GTTATTGAAG AATTAAAAAA TGCATCCCTA
CTTGAAATTG AACTTTTTAC GGGAAAAACT CATCAAATAA GGGTTCATTT ATCGAGTATT
GGAAATTTCA TAATTGGGGA TGAACTTTAT GGTGAAAAAT CAGATTTAAT TGATAGGCAG
GCACTTCACT CAAGCAGTTT AAAATTTATT CACCCGATAA CAAAGGAAAA TATGCATTTT
AAATCAGAAA TTCCAAAAGA TATTAAAAAT TTAGTTGAAA GGCTTAGGAA ATGA
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| Protein sequence | MNNYKILSRK VEKKNAGKKL SDFLSEDFEL SNKMIKKYDK EKKIFVNSKN ISLKSKLVEN
EVVYVNIDAG NNTIIAEEIP ISVIYEDEYV MIIDKPKNMV VHETKNVVSG TLSNAISNRQ
KVNNQNYKIR FVNRLDMDTT GILIVAKNPY SHYLISKQMD EGIFEKKYIC VVNGHLRLKS
GIISNPLDLG EDGIKRELKN TGKESKTKYT VIEELKNASL LEIELFTGKT HQIRVHLSSI
GNFIIGDELY GEKSDLIDRQ ALHSSSLKFI HPITKENMHF KSEIPKDIKN LVERLRK
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