| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mevan_0158 |
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| Symbol | |
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| ID | 5324606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus vannielii SB |
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| Kingdom | Archaea |
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| Replicon accession | NC_009634 |
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| Strand | + |
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| Start bp | 184056 |
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| End bp | 186509 |
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| Gene Length | 2454 bp |
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| Protein Length | 817 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640785823 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_001322681 |
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| Protein GI | 150398914 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA
[COG0551] Zn-finger domain associated with topoisomerase type I |
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| TIGRFAM ID | [TIGR01057] DNA topoisomerase I, archaeal |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.087887 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGGAC TAATTATTTG TGAAAAGCCA AATGTTGCTA AAAAAATTGC TGAAGCCCTT
GGAAAGCCAA AGAAAAAGTC CCACAATTCT GTTCCATATT ATGAACTTGA AAGGAATGGG
GAAGATATAA TTGTAGCTTC CGCCGTAGGT CATCTATATA CGCTACAGGA AAAAGAAAAG
ACAAAATTTG GCGATTATCC AGTATATGAT ATAGAATGGG TTCCAGCATC AACTCTTGAC
GATAAAAAGT ACATTCAAAA ATATATTGAC ACACTTAAAA AGGTTTCAAA AGAGGCCAGC
AAGTTTTACG TTGCAACGGA CTTTGATATA GAAGGGGAAT TGATTGGATA CCATGCATTA
TCTCATGCAT GCGGTCAAAA AAATGCACAT AGATTAAGAT TTTCAAGTTT AACGAAAAAA
GAAATCATAA AATCCTTTGA AAATCCAAAC CAGATCGATT TTGGACTTGT TGATGCAGGG
GATAGTCGGC ATAAAATAGA CTGGTATTTT GGTATAAATG TATCAAGGGC ATTAATGCAG
GCGGTAAGCT CCGCTAAAAG ATGGAAAACA TTAAGTACAG GGCGTGTTCA AGGGCCGGCA
CTTGCATTTT TAGTTGACAA GGAAATTGAG ATTAAAAATT TTATTCCAAC GCCATATTGG
GTACTTGAAG CAGTTTTAGA TAATAATTTA AAAGCACTAC ACGAGTTAGA AAAATTTACT
GACGAAAAAC GTGCAAAAGA AGCTTATGAA AAAGTAAAAA ATGAAAAAGA AGCACTTGTT
ACAGAAATTA AGAAAACTCT AAAAAGTATC CCTCCAAACG TTCCTTTTGA TTTAGGAGCA
TTACAACGGG AAGCGCATAA TGTATTTCGA TTTTCACCTA AAAAAACACA AGAAGTTGCT
CAGAAACTTT ATGAAAAAGG ATATTGTTCT TATCCAAGGA CTAGTTCTCA AAAGCTTCCA
GATGATAAGG CTTATATGGA CGAAGTTTTG AAAAATCTCT CTAAAAACAA AGAATACAGT
AAATACATTG AATTAATTTT AAGTGAAGGT AGAAAACCAG TAGATGGTAA AAAAGACGAT
CCTGCACACC CTGCAATTCA CGCAGTAGAT GTTCCAAAAG AAAATTTACC GGATGATGAA
TTAAAACTTT ATGAACTTAT TGCAAGGCGT ACTATTGCAC TTTATTTGGA TGATGCAAAA
CGGGAATACT CAAAAATAAG TCTTGAAATT AACGGGGAAC CATTTAAATT AAACGGTTCA
AGAACTATCG AGGAAGGATG GCATGAACTA TACTACTTTA CAAAATTCGA TGAAATAGAA
CTTCCAACAT TAAAGAAAAA AGATTTGCTA AGAATAAATG AAATAGCTTT TGAAGAAAAG
GAAACTAAGC CACCTAAACG GTACACGATG GCTTCAATTA TTAAGGAACT TGAAAAAAGA
ACACTTGGAA CAAAGGCTAC TAGGGCTGAC ATTTTAGAAA AATTAACAAA AAGAGGATAC
GTAATTGATG ATGGTTCTTT AACTGTAACT GAACTTGGAA TAGGAGTTAC TGAAACTTTA
AGGAAATTCT GTCCAGAAAT TGTTGAAGAA ACTCTTACAA GGGATTTAGA AAATAAATTA
GAATTGATAC AAGATAAAAA AATTAAAAAA GAAACAGTAA TTAAAGAAAC TAAAGACAAA
TTAACAAAAA TATTGGGCGA ATTTAAGTTA AAAGAAAAAG AAGTAGGAAA TGAATTAGTT
GAAAAGCTCG ATTCTACAAA CCGGTCAATG CAAGTTATTG GAAAATGTAA ATGTGGCGGA
GACATGATAA TTATTCGCAC AAAAGGTAAA AAAAGGTTTG TTGGATGCAG TAATTATCCA
GAATGTGAAA TAACATTCCC TATTCCACAA AAAGGAAGAA TTAAGGTAAT AAATGAAGTT
TGTAAAACTT GTGAAAACCC TATTATCGGT CTTGATTCAA TAAAAATATG TGTAAATCCA
GACTGTAAAA CAAGAATTTC CGAAGAAGAT AGAAAAGAAA TGGAAAAAGC AGCCCTTGAA
GAAAAAAGTT GTCCAAAATG TGGCGGAAAA TTATCAATAA AAAAAGGGCC TTATGGTGTA
TTTAGGGGAT GTGAAAACTA TCCAAAATGT AAATATACTG AAAAATTAAA CGGAGAATCG
AATGAAAAAG AAGTTATTGG AAAATGCCCA AAATGTGGAA ATGACCTTTT GAAACGGAAA
GGTAGGTTTG GGGATTTTAT CGGATGTAGT AACTATCCAA AATGTAGATA CACTGAAAAA
ATAGAAAAGA AAAAAGAAGG GGATTTAGAG GATAAAATAG AAGTAACGAA GGAAAAAGTA
AAGGCTAAAG AAACTTTAAA ATCTGAAAAA AACCTAGATA AAACCTTAGA TAATCCAAAA
CCTAAACGTA CAAAAACTGC ATCAAAAAAG AAAAAAGAAG AGCTTAAAAA TTAA
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| Protein sequence | MTGLIICEKP NVAKKIAEAL GKPKKKSHNS VPYYELERNG EDIIVASAVG HLYTLQEKEK
TKFGDYPVYD IEWVPASTLD DKKYIQKYID TLKKVSKEAS KFYVATDFDI EGELIGYHAL
SHACGQKNAH RLRFSSLTKK EIIKSFENPN QIDFGLVDAG DSRHKIDWYF GINVSRALMQ
AVSSAKRWKT LSTGRVQGPA LAFLVDKEIE IKNFIPTPYW VLEAVLDNNL KALHELEKFT
DEKRAKEAYE KVKNEKEALV TEIKKTLKSI PPNVPFDLGA LQREAHNVFR FSPKKTQEVA
QKLYEKGYCS YPRTSSQKLP DDKAYMDEVL KNLSKNKEYS KYIELILSEG RKPVDGKKDD
PAHPAIHAVD VPKENLPDDE LKLYELIARR TIALYLDDAK REYSKISLEI NGEPFKLNGS
RTIEEGWHEL YYFTKFDEIE LPTLKKKDLL RINEIAFEEK ETKPPKRYTM ASIIKELEKR
TLGTKATRAD ILEKLTKRGY VIDDGSLTVT ELGIGVTETL RKFCPEIVEE TLTRDLENKL
ELIQDKKIKK ETVIKETKDK LTKILGEFKL KEKEVGNELV EKLDSTNRSM QVIGKCKCGG
DMIIIRTKGK KRFVGCSNYP ECEITFPIPQ KGRIKVINEV CKTCENPIIG LDSIKICVNP
DCKTRISEED RKEMEKAALE EKSCPKCGGK LSIKKGPYGV FRGCENYPKC KYTEKLNGES
NEKEVIGKCP KCGNDLLKRK GRFGDFIGCS NYPKCRYTEK IEKKKEGDLE DKIEVTKEKV
KAKETLKSEK NLDKTLDNPK PKRTKTASKK KKEELKN
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