| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mevan_0004 |
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| Symbol | dapF |
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| ID | 5325958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus vannielii SB |
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| Kingdom | Archaea |
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| Replicon accession | NC_009634 |
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| Strand | - |
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| Start bp | 7243 |
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| End bp | 8121 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640785673 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_001322531 |
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| Protein GI | 150398764 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0554484 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAACCTA AATCGTCAAT ATTACCTAAA AATTCAGATA AAGTCGTTAA ATTTACTAAA
ATGCATGGTC TTGGTAATGA CTATATTTAT ATAAATGCAG TTTTGGAAGA TATAAAAAAT
CCAAATGAAT TTTCAAAATT TGTAAGCGAC CGTCATTTTG GAATAGGTTC AGATGGTCTT
GTTTTAATTC TCGATTCTAA AATTGCAGAC TTTAAAATGC GAATGTTTAA TTCAGACGGC
TCAGAAGCAG AAATGTGTGG GAATGCAATT CGATGTGTTG GTAAGTTTGT TTATGATAAT
AAATTAACGG ATAAAAAAAT AATAACAATT GAAACGCTTG CGGGAGTAAA AGTTCTTGAA
ATGACTGTTG AAGGTGAAGA AGTGGTTTTA GTAAAAGTCG ATATGGGTGA ACCAACATTG
GAAGCTTTAA AAATTCCCGT AATTAGCGAT AAATACCCAG TAATTAATGA AACTATCGAT
TCAAACGGTT ACAACTTTAA ATTTACCTGT GTATCGATGG GAAACCCGCA TGCTGTAACA
TATATTGAAG ACGTTGATAA TTTTGAGCTT CAAAAAATAG GGCCTCTTTT TGAAGCTCAC
GAAAAGTTCC CAAAAAAGAC CAATGTTGAA TTCGTAAATG TAATAAATGA TGAAACGTTA
AAAATGAGAG TCTGGGAACG AGGAGCTGGT GAAACGCTTG CATGTGGAAC CGGGGCGTGT
GCTGTTTTGG TTTCAAGTGT TTTAAATGGC CTTTCAAAAA GAAAAGCTAC TGTAAAATTA
CTTGGTGGAG ACTTGATAGT CGAATGGAGT GAATCAAATA ATCACGTTTA CATGACGGGT
CCCGCAACAA AAGTTTTTGA AGGAAAAATT AAACTTTAA
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| Protein sequence | MEPKSSILPK NSDKVVKFTK MHGLGNDYIY INAVLEDIKN PNEFSKFVSD RHFGIGSDGL
VLILDSKIAD FKMRMFNSDG SEAEMCGNAI RCVGKFVYDN KLTDKKIITI ETLAGVKVLE
MTVEGEEVVL VKVDMGEPTL EALKIPVISD KYPVINETID SNGYNFKFTC VSMGNPHAVT
YIEDVDNFEL QKIGPLFEAH EKFPKKTNVE FVNVINDETL KMRVWERGAG ETLACGTGAC
AVLVSSVLNG LSKRKATVKL LGGDLIVEWS ESNNHVYMTG PATKVFEGKI KL
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