| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_4538 |
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| Symbol | |
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| ID | 4178501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008243 |
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| Strand | - |
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| Start bp | 102238 |
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| End bp | 103314 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638059424 |
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| Product | tartrate dehydrogenase |
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| Protein accession | YP_666146 |
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| Protein GI | 110347329 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR02089] tartrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAAATA GTCGCCGTTA TCGCATCGCC GTCATTCCCG GAGACGGGAT AGGCAAGGAA
GTCGTCCCGG AGGGGCTGGC GGTCCTGGAG GCCGTCGCCG CGAAATACGG GATCGAAATC
ATCTTCAACC ATTTCGATTT CGCCTCCTGC GACTATTACC TGCGGCATGG CCGCATGCTG
CCGGAGGACT GGAAACAGCA GATCGGGTCG CATGACGCGA TCTTCTTCGG CGCGGTCGGC
TGGCCGCAGA TCGTCCCCGA CCACGTAGCG CTGTGGGGAT CGCTCGTGCA GTTCCGCCGG
GAGTTCGATC AGTATATCAA CCTGCGGCCG GTACGGCTGA TGGAGGGCGT TCCCTGTCCC
CTACAGGGCC GCAAGCCGGG TGACATCGAC TTCTACGTTG TGCGGGAGAA CACCGAAGGC
GAATATTCTT CCATCGGTGG GCGTATCTTT GCCGGCACCG AGCGCGAAGT AGTGATGCAG
GAAACGGTGC TGACCCGGAC GGGAACGGAT CGTGTCCTGC GCTTCGCCTT CCAGCTGGCG
GCGCAGCGCA AAAAGAAGCA CCTCACCTCC GCCACGAAGT CCAACGGCAT CTCGATCACC
ATGCCCTATT GGGACGAGCG GGTGGAGCAG ATGGCTAGGA ACTTTCCGGA TGTCATCTGG
GACAAGTACC ATATCGACAT CCTCTGCGCC CACCTCGTGC TGCATCCCGA TTGGTTCGAC
GTGGTCGTCG CCTCGAATTT GTTTGGCGAT ATCCTGTCCG ACCTCGGTCC GGCCTGCACC
GGCACGATTG GGATTGCCCC CTCCGGCAAT ATCAATCCGG AGCGGACGTT CCCCTCGCTC
TTCGAGCCGG TGCACGGGTC GGCGCCGGAT ATTGCCGGAC TCGGCATCGC CAATCCGATC
GGACAAATCT GGTCCGTGTC GATGATGCTG GACCATCTCG GGGAGCCGGA AGCCGCCGCG
TCGATCGTGA AGGCCATGGA GACAGTACTT CGCGAACCGA AGCTCCGGAC GCGGGATCTC
GGCGGAACCG CCGATACCCG TACATGCGGA AAGGCTGTCG CGGCCGCCAT TTCCTGA
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| Protein sequence | MGNSRRYRIA VIPGDGIGKE VVPEGLAVLE AVAAKYGIEI IFNHFDFASC DYYLRHGRML
PEDWKQQIGS HDAIFFGAVG WPQIVPDHVA LWGSLVQFRR EFDQYINLRP VRLMEGVPCP
LQGRKPGDID FYVVRENTEG EYSSIGGRIF AGTEREVVMQ ETVLTRTGTD RVLRFAFQLA
AQRKKKHLTS ATKSNGISIT MPYWDERVEQ MARNFPDVIW DKYHIDILCA HLVLHPDWFD
VVVASNLFGD ILSDLGPACT GTIGIAPSGN INPERTFPSL FEPVHGSAPD IAGLGIANPI
GQIWSVSMML DHLGEPEAAA SIVKAMETVL REPKLRTRDL GGTADTRTCG KAVAAAIS
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