Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_4534 |
Symbol | |
ID | 4178497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008243 |
Strand | - |
Start bp | 96341 |
End bp | 97438 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638059420 |
Product | ABC transporter related |
Protein accession | YP_666142 |
Protein GI | 110347325 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0251009 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGTGG CTGTCCAACT TCAGAAAATT CGCAAGAGCT ATGGCGCGGC GGAGATCATC AAGGGTCTCG ATCTCACGAT CGAGGACGGA TCTTTCACCT CGCTCCTCGG GCCGAGCGGC TGCGGCAAGA CCACCCTGCT CAACATGATC GGAGGACTAG ATCAGCCTAC GACGGGCAGC ATCCAGATCT ATACCGACAC AGTATTCTCG AGTGATGACT ACATCAACGT GCCGATAGAG CGGCGCAATG TGGGCTTCGT CTTTCAGAAC TACGCCCTCT GGCCACATAT GACGGTGCTC CAGAACGTCG GTTATTCGCT CCGGATCCGC CGACTGGACA AAATGGAGCG CGAAAAACAG TCGCGCGAAA TGCTGGACCG GCTGGAGCTT GGTGGTCTTG CCAATCGCTA TCCGTATCAG CTGTCCGGTG GTCAGCAGCA GCGCGTGGCG ATTGCCCGCG CGCTTGTCTA TCAGCCGCGC CTGCTGCTGC TCGATGAGCC GCTTTCGAAC CTTGATGCGC AATTGAGGGA AAGGGCTCGG TCCTGGCTGA AGGATATCCA CCAGAACTTC AAGCTCACGA CGATTCTCGT TACCCACGAC CAGATCGAGG CGCTGTCGCT CAGCGACCAG GTGGTGTTGC TCAGCAAGGT TGGAATCGAG CAGTTCGGCA GCGCTTCGGA GATCTACACG CGTCCCGCGA CGGCCTATGT GGCAGATTTC GTCGGCGGTG CGAACATCAT TCCCGGCAAG CTGATCGGCA TGCCCGATAA AGCAACCGGT GCAATGGCAA CCGTTGAGAC CGCCGACGGC ACGCGCATTT CCGCCCGGTC CGACCTTCCC GCACGGATCG GATCGGAGGT CAGCGTCGCC GTCCGGCCGC AGAAGATCGT GCTGACGGGA GGACAGGCGA GGTCGGAAAA ATCCGGCGCG GTGGTGCCCT TCAAGCCGAG AATCGTCCTC TATCAGGGTG CCCAGTACGA GATCGTCGGC GACACGCCTT TCGGTCCCCT GCGGATTCAG ACCGAGCAGC AGCCAACCGA ACAGACCATG GCAAGCGCAC TGCTGCCGGC AGAGGAGTGC CTGTGCGTGC GCCCTTGA
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Protein sequence | MNVAVQLQKI RKSYGAAEII KGLDLTIEDG SFTSLLGPSG CGKTTLLNMI GGLDQPTTGS IQIYTDTVFS SDDYINVPIE RRNVGFVFQN YALWPHMTVL QNVGYSLRIR RLDKMEREKQ SREMLDRLEL GGLANRYPYQ LSGGQQQRVA IARALVYQPR LLLLDEPLSN LDAQLRERAR SWLKDIHQNF KLTTILVTHD QIEALSLSDQ VVLLSKVGIE QFGSASEIYT RPATAYVADF VGGANIIPGK LIGMPDKATG AMATVETADG TRISARSDLP ARIGSEVSVA VRPQKIVLTG GQARSEKSGA VVPFKPRIVL YQGAQYEIVG DTPFGPLRIQ TEQQPTEQTM ASALLPAEEC LCVRP
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