| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_4484 |
|---|
| Symbol | |
|---|
| ID | 4178420 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008243 |
|---|
| Strand | + |
|---|
| Start bp | 47150 |
|---|
| End bp | 48181 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638059373 |
|---|
| Product | oxidoreductase-like |
|---|
| Protein accession | YP_666095 |
|---|
| Protein GI | 110347278 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.418021 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAGCA AAACGGCGCC GGTACGGTTT GGAATTATCG GTCTGGGGTT CGGCGCGGGC
CGCATCCCAA TGATCGAATC CTGCGCGGAG ACGGAGCTCG TCGCCGTCAG CGCCCGGTCC
GAGGAAAAGG CCCGCGAGGT GGGTGAGAAG CACGGCGTCG ACTGGCACAC CGATTACAAT
GACCTGCTGG CGCGCGACGA CATCGACGTG GTGGGCCTCT ACACCCCTTC GGGCGCGCAC
CTGGACATCG CGCTGGCCGC GGCAAAGGCG GGCAAGCACA TGGTCGCTAC CAAGCCGCTT
GAGATCAATC TCAAGCGCGT GGACGAGATC ATCGCCGCCT ATGACGCGGC GGGGCTGAAG
CTCGCCACCG AATACGTGGT GCGCTACCTG CCGGGCAATT ACGCGCTGCA CCAGGCGGTG
ACTTCAGGCA AGCTGGGCAA GATGATCCTT GGCGAATTCA GCGAGAAGCT CTACCGCCCG
CAATGGTACT ACGAACTTGA CGGCGGCTGG CGGTCGAAGT GGGAAGTCTC GGGCGGCGGC
ACCGTAGTCA ACCAGACGAT CCACACCCTG GACCAGATGC AGTGGATGTT CGGCAAGGTT
GAAAGCGTGA CCGCCTTCAT GGGTACCTAC ATGGCCAACA TCGAAAGCGA GGATACCGCG
ACGGCGATGG TGAAATTCAC CAGCGGCGCC ATTGGCATAG TTGTCGGCAC CACGACCTTC
CGCAACGAGA AGCCGCCGAC ACGCTATGGC GGCGGCACCA TGCGCCGGAT CGAGGTGAAC
GGTGATCTGG GTAGCGCACG GATCGAGGAC GAGACGATCA CGATGATGGC GATAGAGGGT
GACCCCGAGT TGCCGCGCGA GGTGCAGCCG CCGGCAGCGA ACGTTTTCGA GGACATGGCC
CGCTGGGTGC GCGACGACGC CTACGACTCC CCGACGCTGG TTAAGCCAGC CGAGTCCCGC
GCGTCAATGG AGCTGGTGCT GGCGATCTAT GAATCCGCGC GGTCCGGCAA GACCGTCGTG
CTGAACAGCT AG
|
|---|
| Protein sequence | MTSKTAPVRF GIIGLGFGAG RIPMIESCAE TELVAVSARS EEKAREVGEK HGVDWHTDYN
DLLARDDIDV VGLYTPSGAH LDIALAAAKA GKHMVATKPL EINLKRVDEI IAAYDAAGLK
LATEYVVRYL PGNYALHQAV TSGKLGKMIL GEFSEKLYRP QWYYELDGGW RSKWEVSGGG
TVVNQTIHTL DQMQWMFGKV ESVTAFMGTY MANIESEDTA TAMVKFTSGA IGIVVGTTTF
RNEKPPTRYG GGTMRRIEVN GDLGSARIED ETITMMAIEG DPELPREVQP PAANVFEDMA
RWVRDDAYDS PTLVKPAESR ASMELVLAIY ESARSGKTVV LNS
|
|---|
| |