Gene Meso_4439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_4439 
Symbol 
ID4178575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008242 
Strand
Start bp341054 
End bp341551 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content48% 
IMG OID638059328 
Productsignal peptidase II 
Protein accessionYP_666050 
Protein GI110347232 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0597] Lipoprotein signal peptidase 
TIGRFAM ID[TIGR00077] lipoprotein signal peptidase 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGCGAT CCACTAATTT AACTCGAGTT CTCCTCGGTC TCGCCTGCGT GGCTTTGGCG 
TTCTCGATCG ACCAACTGTC CAAGTTTGTA ATCGTCGAGT TTATCATGCA ACCGCCAAGG
GAAATTTATA TAACTGAATT TCTGAATATT GTTCTTTCTT ACAATACAGG AATAAGCTTC
GGAATCCTGT CCGGTTATTT TTCCAGCTCT TCCTCTTCGC TGTCATTCCT GACATCGGTC
GTTGTCGGAT TTCTGTTTGT TTGGATGCTT TATGCAAAGA CGAACGGCCA TACCATGGCG
CTGGGACTGA TAACGGGAGG TGCGAGCGGG AATATCTACG ACCGAATGCG ACAAGGCGCG
GTTACTGATT TCATCGACCT TCATTTAGGT GCCTGGCATT GGCCGACATT CAATACTGCT
GATATCGCGA TTGTGGTTGG AGCGGCAATT TTGATTGCAG ATTCTTTCCG CTCCAAGCCC
GGGCAACCTG CTGGATGA
 
Protein sequence
MKRSTNLTRV LLGLACVALA FSIDQLSKFV IVEFIMQPPR EIYITEFLNI VLSYNTGISF 
GILSGYFSSS SSSLSFLTSV VVGFLFVWML YAKTNGHTMA LGLITGGASG NIYDRMRQGA
VTDFIDLHLG AWHWPTFNTA DIAIVVGAAI LIADSFRSKP GQPAG