Gene Meso_4345 details

Gene Information

• Locus tag: Meso_4345
• ID: 4178829
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chelativorans sp. BNC1
• Kingdom: Bacteria
• Replicon accession: NC_008242
• Strand: -
• Start bp: 246237
• End bp: 246932
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 638059240
• Product: type IV secretion system
• Protein accession: YP_665962
• Protein GI: 110347144
• TIGRFAM ID: [TIGR02791] P-type DNA transfer protein VirB5

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTATGC GCAAATCGAT GATGGCTGCC GCCATCCTTG TCCTGTCGGC CAGCGGCGCC 
GGCGCGCAAG GGATTCCCGT GATCGACCAG ACGGCGATCC TGAAGCACAT TGAGAGCATC 
ACCCAGCTCA AGTCGCAGCT TGACGCGCTC AATCAGCAAA TCACCCAAGC CGAGCAATTG 
TTCGGATCGC TGAACAAGCT GACGAACATG GCCGATGTTG TTTCCCTCCT GAACCAGCCG 
GAAATCCGCA AAGCCTTACC GCAAGACTTT GCGGCGATCG AAAGCCTGCT CAGCGGCAAC 
GGCTCGGGTG CGTTCGGCGA TGCCGCCTCG AAATTCCTCG GCGAGAACTC GACCTACCAG 
ACCTCGGCCA ACGATTTCTA CGCCCAGGAA CTGGCGCGCG TTCAGAACCG CAATGCCGGC 
CAAATGAGCC TTGGCCAGCA GATTTACGAT GCCGCCACCA AGCGCATCGA TGGGATCGAT 
CAGTTGCGCC AGCAGATATC GTCGGCAAGC GATGCCAAGG ACATCGCCGA TCTCCAGGCG 
CGCATTCAGG CCGAAAGTGC CTTCCTGCAG ACCGATCTCC TTAGGATGCA GGGGCTGCAG 
ATGGTCCAGC AGGCGCAGGC CCAGGTCGAG GATCAGCGCA AGGCGGAAGA CTGGCGCAAG 
CGCATCGACA CGATGAACAC GGCGCTGTCG CAATGA 

 

Protein sequence

MRMRKSMMAA AILVLSASGA GAQGIPVIDQ TAILKHIESI TQLKSQLDAL NQQITQAEQL 
FGSLNKLTNM ADVVSLLNQP EIRKALPQDF AAIESLLSGN GSGAFGDAAS KFLGENSTYQ 
TSANDFYAQE LARVQNRNAG QMSLGQQIYD AATKRIDGID QLRQQISSAS DAKDIADLQA 
RIQAESAFLQ TDLLRMQGLQ MVQQAQAQVE DQRKAEDWRK RIDTMNTALS Q